Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
CAPN2P17655 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CAPN2P17655 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CAPN2P17655 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CAPN2P17655 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.7■□□□□ 0.42
CAPN2P17655 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPN2P17655 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPN2P17655 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPN2P17655 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.7■□□□□ 0.42
CAPN2P17655 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPN2P17655 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 MTX1P1-201ENST00000440904 838 ntBASIC17.7■□□□□ 0.42
CAPN2P17655 LDHBP1-201ENST00000455730 1119 ntBASIC17.7■□□□□ 0.42
CAPN2P17655 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPN2P17655 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.7■□□□□ 0.42
CAPN2P17655 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.7■□□□□ 0.42
CAPN2P17655 MIR4706-201ENST00000582134 82 ntBASIC17.7■□□□□ 0.42
CAPN2P17655 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.7■□□□□ 0.42
CAPN2P17655 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPN2P17655 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CAPN2P17655 SPCS2P2-201ENST00000603270 608 ntBASIC17.7■□□□□ 0.42
CAPN2P17655 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CAPN2P17655 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.7■□□□□ 0.42
CAPN2P17655 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CAPN2P17655 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.7■□□□□ 0.42
CAPN2P17655 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CAPN2P17655 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CAPN2P17655 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CAPN2P17655 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.69■□□□□ 0.42
CAPN2P17655 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CAPN2P17655 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN2P17655 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CAPN2P17655 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CAPN2P17655 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN2P17655 AC079781.5-202ENST00000641784 3743 ntBASIC17.69■□□□□ 0.42
CAPN2P17655 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN2P17655 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN2P17655 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN2P17655 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC17.69■□□□□ 0.42
CAPN2P17655 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.69■□□□□ 0.42
CAPN2P17655 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.69■□□□□ 0.42
CAPN2P17655 TARDBPP1-201ENST00000442013 1203 ntBASIC17.69■□□□□ 0.42
CAPN2P17655 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.69■□□□□ 0.42
CAPN2P17655 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.69■□□□□ 0.42
CAPN2P17655 AC015910.1-201ENST00000579400 975 ntBASIC17.69■□□□□ 0.42
CAPN2P17655 AC104982.3-201ENST00000581995 514 ntBASIC17.69■□□□□ 0.42
CAPN2P17655 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.69■□□□□ 0.42
CAPN2P17655 AC005695.3-201ENST00000614522 232 ntBASIC17.69■□□□□ 0.42
CAPN2P17655 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN2P17655 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CAPN2P17655 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN2P17655 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.69■□□□□ 0.42
CAPN2P17655 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN2P17655 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CAPN2P17655 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN2P17655 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
CAPN2P17655 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.69■□□□□ 0.42
CAPN2P17655 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN2P17655 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN2P17655 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CAPN2P17655 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN2P17655 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CAPN2P17655 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.68■□□□□ 0.42
CAPN2P17655 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN2P17655 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN2P17655 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CAPN2P17655 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN2P17655 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.68■□□□□ 0.42
CAPN2P17655 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CAPN2P17655 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN2P17655 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CAPN2P17655 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN2P17655 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CAPN2P17655 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CAPN2P17655 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CAPN2P17655 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPN2P17655 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CAPN2P17655 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPN2P17655 HOMER2P2-201ENST00000451621 847 ntBASIC17.68■□□□□ 0.42
CAPN2P17655 VDAC1P7-201ENST00000462417 847 ntBASIC17.68■□□□□ 0.42
CAPN2P17655 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.68■□□□□ 0.42
CAPN2P17655 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms