Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.97□□□□□ -0.01
CDH1P12830 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.97□□□□□ -0.01
CDH1P12830 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CDH1P12830 AC008761.3-201ENST00000624803 892 ntBASIC14.97□□□□□ -0.01
CDH1P12830 OR2I1P-210ENST00000642037 4691 ntBASIC14.97□□□□□ -0.01
CDH1P12830 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH1P12830 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CDH1P12830 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH1P12830 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH1P12830 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH1P12830 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH1P12830 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
CDH1P12830 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH1P12830 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH1P12830 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH1P12830 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH1P12830 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH1P12830 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CDH1P12830 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH1P12830 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.97□□□□□ -0.01
CDH1P12830 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CDH1P12830 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH1P12830 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CDH1P12830 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH1P12830 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CDH1P12830 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDH1P12830 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 MEP1AP4-201ENST00000423244 1087 ntBASIC14.96□□□□□ -0.01
CDH1P12830 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH1P12830 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH1P12830 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH1P12830 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH1P12830 AL132655.2-201ENST00000596276 594 ntBASIC14.96□□□□□ -0.01
CDH1P12830 AL161772.1-201ENST00000610494 4412 ntBASIC14.96□□□□□ -0.01
CDH1P12830 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.96□□□□□ -0.01
CDH1P12830 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH1P12830 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CDH1P12830 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
CDH1P12830 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CDH1P12830 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.96□□□□□ -0.01
CDH1P12830 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CDH1P12830 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
CDH1P12830 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.96□□□□□ -0.02
CDH1P12830 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH1P12830 SLC7A15P-201ENST00000424028 1363 ntBASIC14.96□□□□□ -0.02
CDH1P12830 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH1P12830 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
CDH1P12830 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH1P12830 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CDH1P12830 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.96□□□□□ -0.02
CDH1P12830 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CDH1P12830 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CDH1P12830 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 AC007541.1-201ENST00000570282 1469 ntBASIC14.95□□□□□ -0.02
CDH1P12830 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CDH1P12830 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CDH1P12830 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.95□□□□□ -0.02
CDH1P12830 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.95□□□□□ -0.02
CDH1P12830 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CDH1P12830 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.95□□□□□ -0.02
CDH1P12830 RN7SL399P-201ENST00000471648 279 ntBASIC14.95□□□□□ -0.02
CDH1P12830 FAM86LP-201ENST00000478302 853 ntBASIC14.95□□□□□ -0.02
CDH1P12830 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CDH1P12830 AC055876.2-201ENST00000531834 546 ntBASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms