Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 CICP23-201ENST00000605013 2741 ntBASIC15.49■□□□□ 0.07
HLA-DQB2P05538 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HLA-DQB2P05538 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 AC067930.6-201ENST00000623257 4947 ntBASIC15.48■□□□□ 0.07
HLA-DQB2P05538 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 KLF2P2-201ENST00000416807 1039 ntBASIC15.48■□□□□ 0.07
HLA-DQB2P05538 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 AP005018.1-201ENST00000525475 301 ntBASIC15.48■□□□□ 0.07
HLA-DQB2P05538 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 KRT8P14-201ENST00000414254 1442 ntBASIC15.48■□□□□ 0.07
HLA-DQB2P05538 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HLA-DQB2P05538 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 MSTO2P-201ENST00000314835 1709 ntBASIC15.47■□□□□ 0.07
HLA-DQB2P05538 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 AC093433.1-201ENST00000458048 571 ntBASIC15.47■□□□□ 0.07
HLA-DQB2P05538 RN7SL692P-201ENST00000464677 288 ntBASIC15.47■□□□□ 0.07
HLA-DQB2P05538 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 AP001063.1-201ENST00000568332 529 ntBASIC15.47■□□□□ 0.07
HLA-DQB2P05538 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.47■□□□□ 0.07
HLA-DQB2P05538 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms