Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
OPN1SWP03999 Z97205.2-201ENST00000564697 1639 ntBASIC14.36□□□□□ -0.11
OPN1SWP03999 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
OPN1SWP03999 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
OPN1SWP03999 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.36□□□□□ -0.11
OPN1SWP03999 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.36□□□□□ -0.11
OPN1SWP03999 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.36□□□□□ -0.11
OPN1SWP03999 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
OPN1SWP03999 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
OPN1SWP03999 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
OPN1SWP03999 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
OPN1SWP03999 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
OPN1SWP03999 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
OPN1SWP03999 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
OPN1SWP03999 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
OPN1SWP03999 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.35□□□□□ -0.11
OPN1SWP03999 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
OPN1SWP03999 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.35□□□□□ -0.11
OPN1SWP03999 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.35□□□□□ -0.11
OPN1SWP03999 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.35□□□□□ -0.11
OPN1SWP03999 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
OPN1SWP03999 AC112482.1-201ENST00000492080 688 ntBASIC14.35□□□□□ -0.11
OPN1SWP03999 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.35□□□□□ -0.11
OPN1SWP03999 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.35□□□□□ -0.11
OPN1SWP03999 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.35□□□□□ -0.11
OPN1SWP03999 AL033527.5-202ENST00000641632 1098 ntBASIC14.35□□□□□ -0.11
OPN1SWP03999 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
OPN1SWP03999 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.35□□□□□ -0.11
OPN1SWP03999 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.35□□□□□ -0.11
OPN1SWP03999 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
OPN1SWP03999 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.35□□□□□ -0.11
OPN1SWP03999 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.35□□□□□ -0.11
OPN1SWP03999 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.35□□□□□ -0.11
OPN1SWP03999 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
OPN1SWP03999 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.35□□□□□ -0.11
OPN1SWP03999 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.34□□□□□ -0.11
OPN1SWP03999 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.34□□□□□ -0.11
OPN1SWP03999 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
OPN1SWP03999 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.34□□□□□ -0.11
OPN1SWP03999 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.34□□□□□ -0.11
OPN1SWP03999 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.34□□□□□ -0.11
OPN1SWP03999 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.34□□□□□ -0.11
OPN1SWP03999 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
OPN1SWP03999 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.34□□□□□ -0.11
OPN1SWP03999 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 AL133267.1-201ENST00000398220 340 ntBASIC14.34□□□□□ -0.11
OPN1SWP03999 RPL37AP1-201ENST00000412502 279 ntBASIC14.34□□□□□ -0.11
OPN1SWP03999 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.34□□□□□ -0.11
OPN1SWP03999 SPDYE7P-202ENST00000420373 878 ntBASIC14.34□□□□□ -0.11
OPN1SWP03999 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.34□□□□□ -0.11
OPN1SWP03999 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.34□□□□□ -0.11
OPN1SWP03999 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.34□□□□□ -0.11
OPN1SWP03999 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 SERBP1P3-201ENST00000459980 809 ntBASIC14.34□□□□□ -0.11
OPN1SWP03999 MIR3687-2-201ENST00000577708 61 ntBASIC14.34□□□□□ -0.11
OPN1SWP03999 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.34□□□□□ -0.11
OPN1SWP03999 MIR3687-1-201ENST00000614492 61 ntBASIC14.34□□□□□ -0.11
OPN1SWP03999 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.34□□□□□ -0.11
OPN1SWP03999 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.34□□□□□ -0.11
OPN1SWP03999 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.34□□□□□ -0.11
OPN1SWP03999 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.34□□□□□ -0.11
OPN1SWP03999 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
OPN1SWP03999 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
OPN1SWP03999 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
OPN1SWP03999 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms