Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SEMA3DO95025 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEMA3DO95025 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.72□□□□□ -0.05
SEMA3DO95025 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.72□□□□□ -0.05
SEMA3DO95025 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.72□□□□□ -0.05
SEMA3DO95025 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.72□□□□□ -0.05
SEMA3DO95025 GAPDHP40-201ENST00000505218 1006 ntBASIC14.72□□□□□ -0.05
SEMA3DO95025 DOC2GP-202ENST00000514950 1163 ntBASIC14.72□□□□□ -0.05
SEMA3DO95025 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
SEMA3DO95025 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.72□□□□□ -0.05
SEMA3DO95025 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.72□□□□□ -0.05
SEMA3DO95025 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SEMA3DO95025 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.72□□□□□ -0.05
SEMA3DO95025 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.72□□□□□ -0.05
SEMA3DO95025 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SEMA3DO95025 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEMA3DO95025 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SEMA3DO95025 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEMA3DO95025 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEMA3DO95025 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SEMA3DO95025 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEMA3DO95025 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
SEMA3DO95025 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEMA3DO95025 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SEMA3DO95025 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.72□□□□□ -0.05
SEMA3DO95025 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEMA3DO95025 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEMA3DO95025 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SEMA3DO95025 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEMA3DO95025 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEMA3DO95025 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SEMA3DO95025 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.72□□□□□ -0.05
SEMA3DO95025 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEMA3DO95025 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SEMA3DO95025 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SEMA3DO95025 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.71□□□□□ -0.05
SEMA3DO95025 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 CLK3P2-201ENST00000427566 1453 ntBASIC14.71□□□□□ -0.05
SEMA3DO95025 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.71□□□□□ -0.05
SEMA3DO95025 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.71□□□□□ -0.05
SEMA3DO95025 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SEMA3DO95025 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.71□□□□□ -0.05
SEMA3DO95025 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.71□□□□□ -0.05
SEMA3DO95025 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.71□□□□□ -0.05
SEMA3DO95025 SAMD11P1-201ENST00000571429 661 ntBASIC14.71□□□□□ -0.05
SEMA3DO95025 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.71□□□□□ -0.05
SEMA3DO95025 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.71□□□□□ -0.05
SEMA3DO95025 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.71□□□□□ -0.05
SEMA3DO95025 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.71□□□□□ -0.05
SEMA3DO95025 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 LINC01101-201ENST00000622953 1884 ntBASIC14.71□□□□□ -0.05
SEMA3DO95025 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SEMA3DO95025 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
SEMA3DO95025 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SEMA3DO95025 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.71□□□□□ -0.06
SEMA3DO95025 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SEMA3DO95025 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SEMA3DO95025 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SEMA3DO95025 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
SEMA3DO95025 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEMA3DO95025 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.7□□□□□ -0.06
SEMA3DO95025 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEMA3DO95025 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SEMA3DO95025 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.7□□□□□ -0.06
SEMA3DO95025 REXO1L4P-201ENST00000605109 1937 ntBASIC14.7□□□□□ -0.06
SEMA3DO95025 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEMA3DO95025 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SEMA3DO95025 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.7□□□□□ -0.06
SEMA3DO95025 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SEMA3DO95025 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEMA3DO95025 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
SEMA3DO95025 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.7□□□□□ -0.06
SEMA3DO95025 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEMA3DO95025 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEMA3DO95025 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.7□□□□□ -0.06
SEMA3DO95025 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SEMA3DO95025 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEMA3DO95025 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEMA3DO95025 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SEMA3DO95025 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SEMA3DO95025 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SEMA3DO95025 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SEMA3DO95025 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms