Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AC092053.1-201ENST00000605787 1936 ntBASIC21.64■■□□□ 1.05
MSH5O43196 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
MSH5O43196 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
MSH5O43196 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
MSH5O43196 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC21.64■■□□□ 1.05
MSH5O43196 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MSH5O43196 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
MSH5O43196 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
MSH5O43196 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC21.64■■□□□ 1.05
MSH5O43196 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
MSH5O43196 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21.63■■□□□ 1.05
MSH5O43196 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
MSH5O43196 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
MSH5O43196 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC21.63■■□□□ 1.05
MSH5O43196 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC21.63■■□□□ 1.05
MSH5O43196 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 AL135937.1-201ENST00000418690 729 ntTSL 3 BASIC21.63■■□□□ 1.05
MSH5O43196 LINC00358-201ENST00000432697 1276 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 U91328.1-201ENST00000437528 223 ntBASIC21.63■■□□□ 1.05
MSH5O43196 AC140481.2-201ENST00000457169 695 ntTSL 2 BASIC21.63■■□□□ 1.05
MSH5O43196 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC21.63■■□□□ 1.05
MSH5O43196 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC21.63■■□□□ 1.05
MSH5O43196 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC21.63■■□□□ 1.05
MSH5O43196 AC027307.2-201ENST00000591252 911 ntBASIC21.63■■□□□ 1.05
MSH5O43196 AC078795.3-201ENST00000602913 472 ntBASIC21.63■■□□□ 1.05
MSH5O43196 AC107304.1-201ENST00000604229 296 ntBASIC21.63■■□□□ 1.05
MSH5O43196 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC21.63■■□□□ 1.05
MSH5O43196 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21.63■■□□□ 1.05
MSH5O43196 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
MSH5O43196 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
MSH5O43196 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
MSH5O43196 OR6B2-201ENST00000402971 1492 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
MSH5O43196 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
MSH5O43196 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
MSH5O43196 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
MSH5O43196 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MSH5O43196 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC21.62■■□□□ 1.05
MSH5O43196 AP002414.2-201ENST00000591780 3365 ntBASIC21.62■■□□□ 1.05
MSH5O43196 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
MSH5O43196 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MSH5O43196 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC21.62■■□□□ 1.05
MSH5O43196 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MSH5O43196 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC21.62■■□□□ 1.05
MSH5O43196 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC21.62■■□□□ 1.05
MSH5O43196 AC022144.1-201ENST00000602255 1580 ntBASIC21.62■■□□□ 1.05
MSH5O43196 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MSH5O43196 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC21.62■■□□□ 1.05
MSH5O43196 AL009178.2-201ENST00000597278 2719 ntBASIC21.62■■□□□ 1.05
MSH5O43196 AC012569.1-201ENST00000591191 1524 ntBASIC21.62■■□□□ 1.05
MSH5O43196 AC013268.4-201ENST00000637413 2228 ntBASIC21.62■■□□□ 1.05
MSH5O43196 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MSH5O43196 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC21.62■■□□□ 1.05
MSH5O43196 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MSH5O43196 AL121978.1-201ENST00000402778 359 ntBASIC21.62■■□□□ 1.05
MSH5O43196 RSL24D1P8-201ENST00000434442 492 ntBASIC21.62■■□□□ 1.05
MSH5O43196 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC21.62■■□□□ 1.05
MSH5O43196 AC006042.1-201ENST00000449931 524 ntTSL 4 BASIC21.62■■□□□ 1.05
MSH5O43196 MTND2P8-201ENST00000450555 1025 ntBASIC21.62■■□□□ 1.05
MSH5O43196 EIF4A2P2-201ENST00000455776 1070 ntBASIC21.62■■□□□ 1.05
MSH5O43196 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC21.62■■□□□ 1.05
MSH5O43196 GK-AS1-201ENST00000464659 651 ntTSL 3 BASIC21.62■■□□□ 1.05
MSH5O43196 AC055758.2-201ENST00000495382 799 ntTSL 2 BASIC21.62■■□□□ 1.05
MSH5O43196 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC21.62■■□□□ 1.05
MSH5O43196 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MSH5O43196 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC21.62■■□□□ 1.05
MSH5O43196 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC21.62■■□□□ 1.05
MSH5O43196 AC124293.1-201ENST00000530034 493 ntBASIC21.62■■□□□ 1.05
MSH5O43196 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC21.62■■□□□ 1.05
MSH5O43196 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.62■■□□□ 1.05
MSH5O43196 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.62■■□□□ 1.05
MSH5O43196 AC126177.8-201ENST00000618339 1015 ntBASIC21.62■■□□□ 1.05
MSH5O43196 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC21.62■■□□□ 1.05
MSH5O43196 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
MSH5O43196 AC084121.4-201ENST00000641598 221 ntBASIC21.62■■□□□ 1.05
MSH5O43196 AF228730.8-201ENST00000642140 221 ntBASIC21.62■■□□□ 1.05
MSH5O43196 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MSH5O43196 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MSH5O43196 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
MSH5O43196 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms