RNA–Protein interactions for RNA: ENST00000432697.2

LINC00358-201, long intergenic non-protein coding RNA 358, humanhuman

TSL 1 (best) BASIC

Gene LINC00358, Length 1,276 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00358-201ENST00000432697 AEBP2Q6ZN18 517 aaPredicted RBP28.57■■■□□ 2.16
LINC00358-201ENST00000432697 CHIC1Q5VXU3 224 aa26.83■■□□□ 1.89
LINC00358-201ENST00000432697 SENP3Q9H4L4 574 aaPredicted RBP24.55■■□□□ 1.52
LINC00358-201ENST00000432697 PHF23Q9BUL5 403 aaPredicted RBP24.1■■□□□ 1.45
LINC00358-201ENST00000432697 FOXD1Q16676 465 aa22.84■■□□□ 1.25
LINC00358-201ENST00000432697 NISCHQ9Y2I1 1504 aa22■■□□□ 1.11
LINC00358-201ENST00000432697 POTEDQ86YR6 584 aa21.67■■□□□ 1.06
LINC00358-201ENST00000432697 MSH5O43196 834 aa21.63■■□□□ 1.05
LINC00358-201ENST00000432697 PLPPR3Q6T4P5 718 aa21.3■■□□□ 1
LINC00358-201ENST00000432697 PIAS4Q8N2W9 510 aaPredicted RBP21.28■■□□□ 1
LINC00358-201ENST00000432697 PPP6R1Q9UPN7 881 aa21.01■□□□□ 0.95
LINC00358-201ENST00000432697 ADRA2BP18089 450 aa20.93■□□□□ 0.94
LINC00358-201ENST00000432697 CCDC180Q9P1Z9 1646 aa19.62■□□□□ 0.73
LINC00358-201ENST00000432697 DMRT2Q9Y5R5 561 aa19.38■□□□□ 0.69
LINC00358-201ENST00000432697 ABCC9O60706 1549 aa19.32■□□□□ 0.68
LINC00358-201ENST00000432697 MAPK8IP2Q13387 824 aaPredicted RBP19.31■□□□□ 0.68
LINC00358-201ENST00000432697 SCAF1Q9H7N4 1312 aaKnown RBP19.29■□□□□ 0.68
LINC00358-201ENST00000432697 CACNB1Q02641 598 aaPredicted RBP18.73■□□□□ 0.59
LINC00358-201ENST00000432697 PPP4R3CPQ6ZMV5 832 aa18.57■□□□□ 0.56
LINC00358-201ENST00000432697 DCAF8L1A6NGE4 600 aa18.55■□□□□ 0.56
LINC00358-201ENST00000432697 RB1CC1Q8TDY2 1594 aa18.55■□□□□ 0.56
LINC00358-201ENST00000432697 HOXD11P31277 338 aaPredicted RBP18.53■□□□□ 0.56
LINC00358-201ENST00000432697 NACADO15069 1562 aa18.5■□□□□ 0.55
LINC00358-201ENST00000432697 DCAF8L2P0C7V8 631 aa18.45■□□□□ 0.54
LINC00358-201ENST00000432697 RNF39Q9H2S5 420 aa18.38■□□□□ 0.53
LINC00358-201ENST00000432697 MYO15BQ96JP2 1530 aa18.35■□□□□ 0.53
LINC00358-201ENST00000432697 CNKSR2Q8WXI2 1034 aa18.35■□□□□ 0.53
LINC00358-201ENST00000432697 RNF216Q9NWF9 866 aaPredicted RBP18.29■□□□□ 0.52
LINC00358-201ENST00000432697 ZCCHC6Q5VYS8 1495 aaKnown RBP18.28■□□□□ 0.52
LINC00358-201ENST00000432697 DCAF1Q9Y4B6 1507 aa18.21■□□□□ 0.51
LINC00358-201ENST00000432697 C1QBPQ07021 282 aaKnown RBP18.13■□□□□ 0.49
LINC00358-201ENST00000432697 UNC13AQ9UPW8 1703 aa18.09■□□□□ 0.49
LINC00358-201ENST00000432697 DNAJC5BQ9UF47 199 aa18.06■□□□□ 0.48
LINC00358-201ENST00000432697 PABPN1Q86U42 306 aaKnown RBP eCLIP18.04■□□□□ 0.48
LINC00358-201ENST00000432697 BICRAQ9NZM4 1560 aa17.96■□□□□ 0.47
LINC00358-201ENST00000432697 SCRIBQ14160 1630 aa17.87■□□□□ 0.45
LINC00358-201ENST00000432697 SHROOM4Q9ULL8 1493 aa17.82■□□□□ 0.44
LINC00358-201ENST00000432697 NCBP3Q53F19 620 aaKnown RBP17.81■□□□□ 0.44
LINC00358-201ENST00000432697 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.63■□□□□ 0.41
LINC00358-201ENST00000432697 EIF4G1Q04637 1599 aaKnown RBP17.52■□□□□ 0.39
LINC00358-201ENST00000432697 CC2D2AQ9P2K1 1620 aa17.48■□□□□ 0.39
LINC00358-201ENST00000432697 NPM3O75607 178 aaKnown RBP17.47■□□□□ 0.39
LINC00358-201ENST00000432697 CECR2Q9BXF3 1484 aa17.4■□□□□ 0.38
LINC00358-201ENST00000432697 U3KPZ7 1027 aaPredicted RBP17.19■□□□□ 0.34
LINC00358-201ENST00000432697 SMARCA4P51532 1647 aa17.09■□□□□ 0.33
LINC00358-201ENST00000432697 BAZ1AQ9NRL2 1556 aaPredicted RBP17.07■□□□□ 0.32
LINC00358-201ENST00000432697 NCAPD3P42695 1498 aa17.07■□□□□ 0.32
LINC00358-201ENST00000432697 DSG3P32926 999 aa17.06■□□□□ 0.32
LINC00358-201ENST00000432697 CAPN15O75808 1086 aa17.05■□□□□ 0.32
LINC00358-201ENST00000432697 ATAD2BQ9ULI0 1458 aa17.05■□□□□ 0.32
LINC00358-201ENST00000432697 SMARCA2P51531 1590 aa17.03■□□□□ 0.32
LINC00358-201ENST00000432697 SPINK5Q9NQ38 1064 aaPredicted RBP17.03■□□□□ 0.32
LINC00358-201ENST00000432697 HMGXB3Q12766 1538 aa16.96■□□□□ 0.31
LINC00358-201ENST00000432697 PEG3Q9GZU2 1588 aa16.94■□□□□ 0.3
LINC00358-201ENST00000432697 MROH2BQ7Z745 1585 aa16.94■□□□□ 0.3
LINC00358-201ENST00000432697 POTEHQ6S545 545 aa16.93■□□□□ 0.3
LINC00358-201ENST00000432697 BAZ1BQ9UIG0 1483 aaKnown RBP16.9■□□□□ 0.3
LINC00358-201ENST00000432697 APLP2Q06481 763 aa16.81■□□□□ 0.28
LINC00358-201ENST00000432697 SLC4A2P04920 1241 aa16.77■□□□□ 0.28
LINC00358-201ENST00000432697 KCNA4P22459 653 aa16.77■□□□□ 0.28
LINC00358-201ENST00000432697 WIZO95785 1651 aa16.74■□□□□ 0.27
LINC00358-201ENST00000432697 ZNF219Q9P2Y4 722 aaPredicted RBP16.72■□□□□ 0.27
LINC00358-201ENST00000432697 RSF1Q96T23 1441 aaPredicted RBP16.7■□□□□ 0.26
LINC00358-201ENST00000432697 ERCC6Q03468 1493 aa16.69■□□□□ 0.26
LINC00358-201ENST00000432697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.69■□□□□ 0.26
LINC00358-201ENST00000432697 HNRNPUL2Q1KMD3 747 aaKnown RBP16.69■□□□□ 0.26
LINC00358-201ENST00000432697 NESP48681 1621 aa16.67■□□□□ 0.26
LINC00358-201ENST00000432697 TRHP20396 242 aaPredicted RBP16.66■□□□□ 0.26
LINC00358-201ENST00000432697 LAMC3Q9Y6N6 1575 aa16.64■□□□□ 0.25
LINC00358-201ENST00000432697 ABCB7O75027 752 aa16.58■□□□□ 0.24
LINC00358-201ENST00000432697 TOP2AP11388 1531 aaKnown RBP16.57■□□□□ 0.24
LINC00358-201ENST00000432697 CUX2O14529 1486 aa16.57■□□□□ 0.24
LINC00358-201ENST00000432697 CADPSQ9ULU8 1353 aa16.57■□□□□ 0.24
LINC00358-201ENST00000432697 PDS5BQ9NTI5 1447 aa16.55■□□□□ 0.24
LINC00358-201ENST00000432697 SAMD1Q6SPF0 538 aaPredicted RBP16.55■□□□□ 0.24
LINC00358-201ENST00000432697 KIF21AQ7Z4S6 1674 aa16.46■□□□□ 0.23
LINC00358-201ENST00000432697 THOC2Q8NI27 1593 aaKnown RBP16.45■□□□□ 0.22
LINC00358-201ENST00000432697 CFTRP13569 1480 aa16.43■□□□□ 0.22
LINC00358-201ENST00000432697 RBM42Q9BTD8 480 aaKnown RBP16.38■□□□□ 0.21
LINC00358-201ENST00000432697 CCDC88BA6NC98 1476 aa16.37■□□□□ 0.21
LINC00358-201ENST00000432697 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
LINC00358-201ENST00000432697 MRC2Q9UBG0 1479 aa16.36■□□□□ 0.21
LINC00358-201ENST00000432697 CEP164Q9UPV0 1460 aa16.35■□□□□ 0.21
LINC00358-201ENST00000432697 WDR62O43379 1518 aa16.31■□□□□ 0.2
LINC00358-201ENST00000432697 PRDM2Q13029 1718 aa16.28■□□□□ 0.2
LINC00358-201ENST00000432697 DNAJC5Q9H3Z4 198 aa16.24■□□□□ 0.19
LINC00358-201ENST00000432697 MYCNP04198 464 aaPredicted RBP16.23■□□□□ 0.19
LINC00358-201ENST00000432697 URB2Q14146 1524 aaKnown RBP16.19■□□□□ 0.18
LINC00358-201ENST00000432697 SUPT5HO00267 1087 aaKnown RBP16.17■□□□□ 0.18
LINC00358-201ENST00000432697 POLA2Q14181 598 aa16.15■□□□□ 0.18
LINC00358-201ENST00000432697 ABCC8Q09428 1581 aa16.11■□□□□ 0.17
LINC00358-201ENST00000432697 CHRDL2Q6WN34 429 aa16.1■□□□□ 0.17
LINC00358-201ENST00000432697 TOPBP1Q92547 1522 aa16.09■□□□□ 0.17
LINC00358-201ENST00000432697 DNMBPQ6XZF7 1577 aa16.05■□□□□ 0.16
LINC00358-201ENST00000432697 IFT140Q96RY7 1462 aa16.03■□□□□ 0.16
LINC00358-201ENST00000432697 ZNF608Q9ULD9 1512 aaPredicted RBP15.94■□□□□ 0.14
LINC00358-201ENST00000432697 POLA1P09884 1462 aaPredicted RBP15.93■□□□□ 0.14
LINC00358-201ENST00000432697 TARBP1Q13395 1621 aaKnown RBP15.91■□□□□ 0.14
LINC00358-201ENST00000432697 ZBTB12Q9Y330 459 aaPredicted RBP15.91■□□□□ 0.14
LINC00358-201ENST00000432697 CUX1P39880 1505 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms