Protein–RNA interactions for Protein: O15554

KCNN4, Intermediate conductance calcium-activated potassium channel protein 4, humanhuman

Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4O15554 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
KCNN4O15554 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KCNN4O15554 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
KCNN4O15554 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.78■□□□□ 0.12
KCNN4O15554 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KCNN4O15554 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
KCNN4O15554 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KCNN4O15554 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KCNN4O15554 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.78■□□□□ 0.12
KCNN4O15554 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KCNN4O15554 AC023908.3-201ENST00000564211 3047 ntBASIC15.78■□□□□ 0.12
KCNN4O15554 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KCNN4O15554 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.78■□□□□ 0.12
KCNN4O15554 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KCNN4O15554 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.78■□□□□ 0.12
KCNN4O15554 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.78■□□□□ 0.12
KCNN4O15554 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.78■□□□□ 0.12
KCNN4O15554 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KCNN4O15554 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KCNN4O15554 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
KCNN4O15554 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KCNN4O15554 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KCNN4O15554 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.77■□□□□ 0.12
KCNN4O15554 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KCNN4O15554 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KCNN4O15554 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KCNN4O15554 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KCNN4O15554 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KCNN4O15554 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KCNN4O15554 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KCNN4O15554 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KCNN4O15554 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.77■□□□□ 0.12
KCNN4O15554 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
KCNN4O15554 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.77■□□□□ 0.12
KCNN4O15554 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.77■□□□□ 0.12
KCNN4O15554 SAMD11P1-201ENST00000571429 661 ntBASIC15.77■□□□□ 0.12
KCNN4O15554 AC106028.4-201ENST00000614509 607 ntBASIC15.77■□□□□ 0.12
KCNN4O15554 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.77■□□□□ 0.12
KCNN4O15554 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.77■□□□□ 0.12
KCNN4O15554 AC004840.1-201ENST00000636359 365 ntBASIC15.77■□□□□ 0.12
KCNN4O15554 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.77■□□□□ 0.12
KCNN4O15554 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.77■□□□□ 0.11
KCNN4O15554 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KCNN4O15554 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.77■□□□□ 0.11
KCNN4O15554 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KCNN4O15554 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
KCNN4O15554 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
KCNN4O15554 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KCNN4O15554 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.77■□□□□ 0.11
KCNN4O15554 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
KCNN4O15554 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
KCNN4O15554 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
KCNN4O15554 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
KCNN4O15554 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.76■□□□□ 0.11
KCNN4O15554 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
KCNN4O15554 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.76■□□□□ 0.11
KCNN4O15554 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.76■□□□□ 0.11
KCNN4O15554 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 AC022144.1-201ENST00000602255 1580 ntBASIC15.76■□□□□ 0.11
KCNN4O15554 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.76■□□□□ 0.11
KCNN4O15554 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.76■□□□□ 0.11
KCNN4O15554 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.76■□□□□ 0.11
KCNN4O15554 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 AC004890.2-204ENST00000481968 304 ntBASIC15.76■□□□□ 0.11
KCNN4O15554 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
KCNN4O15554 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.76■□□□□ 0.11
KCNN4O15554 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
KCNN4O15554 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.76■□□□□ 0.11
KCNN4O15554 SRD5A3P1-201ENST00000603021 949 ntBASIC15.76■□□□□ 0.11
KCNN4O15554 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.76■□□□□ 0.11
KCNN4O15554 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.76■□□□□ 0.11
KCNN4O15554 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.76■□□□□ 0.11
KCNN4O15554 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 CLK3P2-201ENST00000427566 1453 ntBASIC15.76■□□□□ 0.11
KCNN4O15554 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
KCNN4O15554 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.76■□□□□ 0.11
KCNN4O15554 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
KCNN4O15554 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.76■□□□□ 0.11
KCNN4O15554 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KCNN4O15554 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.75■□□□□ 0.11
KCNN4O15554 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
KCNN4O15554 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms