Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM38O00635 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM38O00635 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM38O00635 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM38O00635 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM38O00635 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM38O00635 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM38O00635 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM38O00635 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM38O00635 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRIM38O00635 ACTG1P3-201ENST00000431775 1114 ntBASIC15.45■□□□□ 0.06
TRIM38O00635 CTBP2P5-201ENST00000454986 1264 ntBASIC15.45■□□□□ 0.06
TRIM38O00635 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM38O00635 TDH-203ENST00000531764 1110 ntBASIC15.45■□□□□ 0.06
TRIM38O00635 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM38O00635 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM38O00635 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM38O00635 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
TRIM38O00635 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM38O00635 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM38O00635 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM38O00635 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM38O00635 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM38O00635 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM38O00635 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM38O00635 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
TRIM38O00635 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRIM38O00635 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM38O00635 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM38O00635 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRIM38O00635 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRIM38O00635 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM38O00635 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRIM38O00635 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM38O00635 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM38O00635 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRIM38O00635 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM38O00635 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM38O00635 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM38O00635 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
TRIM38O00635 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRIM38O00635 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM38O00635 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM38O00635 AC112693.3-201ENST00000624819 1983 ntBASIC15.44■□□□□ 0.06
TRIM38O00635 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM38O00635 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
TRIM38O00635 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM38O00635 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM38O00635 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM38O00635 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM38O00635 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM38O00635 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM38O00635 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM38O00635 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM38O00635 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM38O00635 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.44■□□□□ 0.06
TRIM38O00635 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.44■□□□□ 0.06
TRIM38O00635 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRIM38O00635 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM38O00635 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM38O00635 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM38O00635 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM38O00635 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM38O00635 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM38O00635 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.44■□□□□ 0.06
TRIM38O00635 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.44■□□□□ 0.06
TRIM38O00635 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRIM38O00635 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
TRIM38O00635 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.44■□□□□ 0.06
TRIM38O00635 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.44■□□□□ 0.06
TRIM38O00635 AC011477.6-201ENST00000604980 1927 ntBASIC15.44■□□□□ 0.06
TRIM38O00635 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM38O00635 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM38O00635 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM38O00635 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM38O00635 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM38O00635 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM38O00635 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRIM38O00635 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRIM38O00635 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRIM38O00635 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
TRIM38O00635 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.43■□□□□ 0.06
TRIM38O00635 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM38O00635 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.43■□□□□ 0.06
TRIM38O00635 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRIM38O00635 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.43■□□□□ 0.06
TRIM38O00635 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.43■□□□□ 0.06
TRIM38O00635 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms