Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 AC111170.3-201ENST00000624282 2464 ntBASIC10.76□□□□□ -0.69
LINC01546A6NGU7 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 KHSRPP1-201ENST00000427983 1768 ntBASIC10.76□□□□□ -0.69
LINC01546A6NGU7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 AKR1C7P-201ENST00000305623 895 ntBASIC10.76□□□□□ -0.69
LINC01546A6NGU7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 HLA-H-201ENST00000383620 1096 ntBASIC10.76□□□□□ -0.69
LINC01546A6NGU7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 HIST3H2BA-201ENST00000436555 524 ntBASIC10.76□□□□□ -0.69
LINC01546A6NGU7 TARDBPP1-201ENST00000442013 1203 ntBASIC10.76□□□□□ -0.69
LINC01546A6NGU7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 AC108751.1-201ENST00000490852 363 ntBASIC10.76□□□□□ -0.69
LINC01546A6NGU7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 AC073648.2-201ENST00000510116 352 ntBASIC10.76□□□□□ -0.69
LINC01546A6NGU7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 DET1-205ENST00000558413 583 ntTSL 4 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LINC01546A6NGU7 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 AC215219.1-201ENST00000400706 1817 ntBASIC10.75□□□□□ -0.69
LINC01546A6NGU7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC10.75□□□□□ -0.69
LINC01546A6NGU7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms