Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 FAM90A7P-201ENST00000382628 1395 ntBASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 FAM90A23P-201ENST00000400136 1395 ntBASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 KRT8P21-201ENST00000430398 1491 ntBASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.31■□□□□ 0.52
ZC3H4Q9UPT8 AC092171.3-201ENST00000610122 2651 ntBASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 AL512430.1-201ENST00000392575 860 ntBASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 RPL8P2-201ENST00000430538 502 ntBASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 AC012158.2-201ENST00000536546 354 ntBASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 DUX4L47-201ENST00000566374 394 ntBASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 AL161773.1-201ENST00000624845 863 ntBASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 RNF216P1-203ENST00000404404 2427 ntBASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 AC055811.4-201ENST00000624039 1754 ntBASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZC3H4Q9UPT8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 AC026320.2-201ENST00000434379 478 ntBASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 MIR4313-201ENST00000580760 101 ntBASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 AC007718.1-201ENST00000621078 280 ntBASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 FKBP4P6-201ENST00000457486 1332 ntBASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZC3H4Q9UPT8 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 DNM1P51-201ENST00000558149 522 ntBASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 AC008805.1-201ENST00000590892 364 ntBASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC18.28■□□□□ 0.52
ZC3H4Q9UPT8 AC087392.5-201ENST00000612517 489 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms