Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 AC105250.1-201ENST00000509378 2057 ntBASIC14.18□□□□□ -0.14
NPIPA1Q9UND3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 AC104640.1-201ENST00000562617 2109 ntBASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 AC126177.1-201ENST00000547829 2218 ntBASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 KRT18P43-201ENST00000469825 1281 ntBASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 AP001889.1-201ENST00000525414 633 ntBASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 AC009486.1-201ENST00000569860 813 ntBASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NPIPA1Q9UND3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 AC093525.8-201ENST00000624099 1342 ntBASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 PPT1-215ENST00000641471 2368 ntBASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 AC005229.1-201ENST00000392885 409 ntBASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 BAATP1-201ENST00000412284 1225 ntBASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
NPIPA1Q9UND3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms