Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 AC138969.3-201ENST00000546612 1459 ntBASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 AC138932.2-201ENST00000548268 1459 ntBASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 AC126755.4-201ENST00000549796 1459 ntBASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 AL627223.1-201ENST00000416693 442 ntBASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 RBPMS2P1-201ENST00000437762 623 ntBASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 AL079307.3-201ENST00000556114 283 ntBASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
CDC42SE2Q9NRR3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 CYP2AB1P-202ENST00000454440 1456 ntBASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 HSPA7-201ENST00000445535 1927 ntBASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 AC097359.2-201ENST00000604992 2389 ntBASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 AC015922.1-201ENST00000421102 1152 ntBASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 SERBP1P3-201ENST00000459980 809 ntBASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 ALG1L5P-201ENST00000482043 771 ntBASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 PGAM5P1-201ENST00000518923 814 ntBASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 KRT18P58-201ENST00000527480 1120 ntBASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 AC026150.2-201ENST00000564693 1156 ntBASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 AC005829.1-201ENST00000570002 483 ntBASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
CDC42SE2Q9NRR3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms