Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX8Q9HC52 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX8Q9HC52 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX8Q9HC52 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX8Q9HC52 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX8Q9HC52 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX8Q9HC52 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX8Q9HC52 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX8Q9HC52 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX8Q9HC52 AL592309.1-201ENST00000443127 649 ntBASIC17.12■□□□□ 0.33
CBX8Q9HC52 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 AC140113.2-201ENST00000604370 208 ntBASIC17.12■□□□□ 0.33
CBX8Q9HC52 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX8Q9HC52 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX8Q9HC52 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CBX8Q9HC52 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX8Q9HC52 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX8Q9HC52 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX8Q9HC52 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CBX8Q9HC52 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CBX8Q9HC52 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 AL133267.1-201ENST00000398220 340 ntBASIC17.11■□□□□ 0.33
CBX8Q9HC52 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 KRT18P3-201ENST00000451602 1288 ntBASIC17.11■□□□□ 0.33
CBX8Q9HC52 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 KRT8P12-202ENST00000472924 1397 ntBASIC17.11■□□□□ 0.33
CBX8Q9HC52 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.11■□□□□ 0.33
CBX8Q9HC52 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CBX8Q9HC52 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC17.1■□□□□ 0.33
CBX8Q9HC52 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CBX8Q9HC52 CICP17-201ENST00000418553 2377 ntBASIC17.1■□□□□ 0.33
CBX8Q9HC52 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC17.1■□□□□ 0.33
CBX8Q9HC52 OR2I1P-209ENST00000641730 5365 ntBASIC17.1■□□□□ 0.33
CBX8Q9HC52 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CBX8Q9HC52 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CBX8Q9HC52 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms