Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SH3KBP1Q96B97 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 AL133267.1-201ENST00000398220 340 ntBASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 SOCS2P1-201ENST00000417727 557 ntBASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 U91328.1-201ENST00000437528 223 ntBASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 AC000095.1-201ENST00000603208 874 ntBASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SH3KBP1Q96B97 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 AC127383.1-201ENST00000444697 1800 ntBASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 ATP5G2P4-201ENST00000442175 420 ntBASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 CU634019.7-201ENST00000624153 1185 ntBASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 FP236241.2-201ENST00000624906 1185 ntBASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.22■□□□□ 0.03
SH3KBP1Q96B97 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms