Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAPGEF4Q8WZA2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.85■□□□□ 0.77
RAPGEF4Q8WZA2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.85■□□□□ 0.77
RAPGEF4Q8WZA2 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAPGEF4Q8WZA2 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.85■□□□□ 0.77
RAPGEF4Q8WZA2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAPGEF4Q8WZA2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAPGEF4Q8WZA2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
RAPGEF4Q8WZA2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAPGEF4Q8WZA2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAPGEF4Q8WZA2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAPGEF4Q8WZA2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAPGEF4Q8WZA2 E2F3P2-201ENST00000447755 1422 ntBASIC19.85■□□□□ 0.77
RAPGEF4Q8WZA2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RAPGEF4Q8WZA2 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.85■□□□□ 0.77
RAPGEF4Q8WZA2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 AK6-201ENST00000380818 1183 ntTSL 2 BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 AC010141.1-201ENST00000411585 623 ntBASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 PUDPP3-201ENST00000445368 636 ntBASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 FTLP1-201ENST00000449155 526 ntBASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 AL133499.1-201ENST00000596207 608 ntBASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 AL353726.2-201ENST00000623259 884 ntBASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 AL157791.1-201ENST00000553667 1699 ntBASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 AC020910.5-201ENST00000623668 1865 ntBASIC19.84■□□□□ 0.77
RAPGEF4Q8WZA2 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 MIR33B-201ENST00000385104 96 ntBASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 CMC1-204ENST00000423894 549 ntTSL 2 BASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 EEF1DP6-201ENST00000449232 372 ntBASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 RPL18P13-201ENST00000478088 569 ntBASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
RAPGEF4Q8WZA2 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAPGEF4Q8WZA2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAPGEF4Q8WZA2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAPGEF4Q8WZA2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAPGEF4Q8WZA2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.83■□□□□ 0.76
RAPGEF4Q8WZA2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RAPGEF4Q8WZA2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
RAPGEF4Q8WZA2 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC19.83■□□□□ 0.76
RAPGEF4Q8WZA2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.83■□□□□ 0.76
RAPGEF4Q8WZA2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.83■□□□□ 0.76
RAPGEF4Q8WZA2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.83■□□□□ 0.76
RAPGEF4Q8WZA2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
RAPGEF4Q8WZA2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC19.83■□□□□ 0.76
RAPGEF4Q8WZA2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.83■□□□□ 0.76
RAPGEF4Q8WZA2 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAPGEF4Q8WZA2 LTB4R2-202ENST00000528054 3092 ntBASIC19.82■□□□□ 0.76
RAPGEF4Q8WZA2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RAPGEF4Q8WZA2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
RAPGEF4Q8WZA2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAPGEF4Q8WZA2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.82■□□□□ 0.76
RAPGEF4Q8WZA2 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAPGEF4Q8WZA2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.82■□□□□ 0.76
RAPGEF4Q8WZA2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAPGEF4Q8WZA2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms