Protein–RNA interactions for Protein: Q8TDY2

RB1CC1, RB1-inducible coiled-coil protein 1, humanhuman

Predictions only

Length 1,594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1CC1Q8TDY2 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 AC068831.5-201ENST00000557387 328 ntBASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
RB1CC1Q8TDY2 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 HNRNPA1P42-201ENST00000458678 957 ntBASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 KRT8P28-201ENST00000433288 1390 ntBASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 AC092862.1-201ENST00000541534 533 ntBASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 EMC4-208ENST00000559078 599 ntTSL 3 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 AC013553.1-201ENST00000560906 267 ntBASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 AC012508.2-201ENST00000567613 1472 ntBASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC28.24■■■□□ 2.11
RB1CC1Q8TDY2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RB1CC1Q8TDY2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC28.23■■■□□ 2.11
RB1CC1Q8TDY2 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
RB1CC1Q8TDY2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RB1CC1Q8TDY2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC28.23■■■□□ 2.11
RB1CC1Q8TDY2 TEKT4P2-202ENST00000559466 1312 ntBASIC28.23■■■□□ 2.11
RB1CC1Q8TDY2 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RB1CC1Q8TDY2 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
RB1CC1Q8TDY2 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC28.23■■■□□ 2.11
RB1CC1Q8TDY2 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
RB1CC1Q8TDY2 HELLS-212ENST00000630929 400 ntTSL 5 BASIC28.23■■■□□ 2.11
RB1CC1Q8TDY2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
RB1CC1Q8TDY2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RB1CC1Q8TDY2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
RB1CC1Q8TDY2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC28.23■■■□□ 2.11
RB1CC1Q8TDY2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 AC006372.4-201ENST00000624122 1543 ntBASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 SNX15-201ENST00000352068 771 ntTSL 5 BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 BPIFB5P-201ENST00000457066 1099 ntBASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 CR392039.1-201ENST00000623217 204 ntBASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC28.22■■■□□ 2.11
RB1CC1Q8TDY2 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RB1CC1Q8TDY2 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RB1CC1Q8TDY2 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC28.21■■■□□ 2.11
RB1CC1Q8TDY2 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
RB1CC1Q8TDY2 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC28.21■■■□□ 2.11
RB1CC1Q8TDY2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms