Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 AL162726.2-201ENST00000438986 1017 ntBASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 AC106881.1-201ENST00000605849 3329 ntBASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTPN20Q4JDL3 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 NUS1P3-201ENST00000423502 862 ntBASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 AC025048.6-201ENST00000634326 1161 ntBASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 AL033527.5-201ENST00000641382 801 ntBASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 KRT8P14-201ENST00000414254 1442 ntBASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTPN20Q4JDL3 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.06■□□□□ 0.16
PTPN20Q4JDL3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms