Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC084364.1-201ENST00000551967 1556 ntBASIC12.56□□□□□ -0.4
SPCS3P61009 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SPCS3P61009 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SPCS3P61009 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.56□□□□□ -0.4
SPCS3P61009 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SPCS3P61009 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
SPCS3P61009 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SPCS3P61009 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
SPCS3P61009 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SPCS3P61009 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.56□□□□□ -0.4
SPCS3P61009 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
SPCS3P61009 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC12.56□□□□□ -0.4
SPCS3P61009 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.56□□□□□ -0.4
SPCS3P61009 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.56□□□□□ -0.4
SPCS3P61009 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.56□□□□□ -0.4
SPCS3P61009 AC243562.1-201ENST00000560672 389 ntBASIC12.56□□□□□ -0.4
SPCS3P61009 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.56□□□□□ -0.4
SPCS3P61009 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.56□□□□□ -0.4
SPCS3P61009 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.56□□□□□ -0.4
SPCS3P61009 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.56□□□□□ -0.4
SPCS3P61009 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SPCS3P61009 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.56□□□□□ -0.4
SPCS3P61009 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
SPCS3P61009 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SPCS3P61009 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.56□□□□□ -0.4
SPCS3P61009 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.56□□□□□ -0.4
SPCS3P61009 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
SPCS3P61009 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.56□□□□□ -0.4
SPCS3P61009 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
SPCS3P61009 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
SPCS3P61009 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SPCS3P61009 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPCS3P61009 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC12.56□□□□□ -0.4
SPCS3P61009 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.55□□□□□ -0.4
SPCS3P61009 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SPCS3P61009 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SPCS3P61009 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.55□□□□□ -0.4
SPCS3P61009 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SPCS3P61009 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.55□□□□□ -0.4
SPCS3P61009 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.55□□□□□ -0.4
SPCS3P61009 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.55□□□□□ -0.4
SPCS3P61009 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SPCS3P61009 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.55□□□□□ -0.4
SPCS3P61009 AZGP1P1-201ENST00000411909 902 ntBASIC12.55□□□□□ -0.4
SPCS3P61009 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.55□□□□□ -0.4
SPCS3P61009 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.55□□□□□ -0.4
SPCS3P61009 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.55□□□□□ -0.4
SPCS3P61009 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.55□□□□□ -0.4
SPCS3P61009 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
SPCS3P61009 AC026120.1-201ENST00000611536 926 ntBASIC12.55□□□□□ -0.4
SPCS3P61009 CAND2-206ENST00000626378 333 ntTSL 5 BASIC12.55□□□□□ -0.4
SPCS3P61009 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SPCS3P61009 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SPCS3P61009 AC005562.1-201ENST00000583030 3219 ntBASIC12.55□□□□□ -0.4
SPCS3P61009 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SPCS3P61009 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SPCS3P61009 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
SPCS3P61009 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPCS3P61009 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.55□□□□□ -0.4
SPCS3P61009 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
SPCS3P61009 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms