Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.67□□□□□ -0.22
GFRA1P56159 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 LINC00554-201ENST00000564841 3011 ntBASIC13.67□□□□□ -0.22
GFRA1P56159 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 WASH3P-207ENST00000560956 1394 ntBASIC13.67□□□□□ -0.22
GFRA1P56159 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
GFRA1P56159 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GFRA1P56159 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.67□□□□□ -0.22
GFRA1P56159 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.67□□□□□ -0.22
GFRA1P56159 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
GFRA1P56159 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.66□□□□□ -0.22
GFRA1P56159 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
GFRA1P56159 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
GFRA1P56159 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.66□□□□□ -0.22
GFRA1P56159 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
GFRA1P56159 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.66□□□□□ -0.22
GFRA1P56159 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 AL137783.1-201ENST00000623494 1896 ntBASIC13.66□□□□□ -0.22
GFRA1P56159 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
GFRA1P56159 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
GFRA1P56159 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
GFRA1P56159 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.66□□□□□ -0.22
GFRA1P56159 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 POM121L8P-201ENST00000417732 1281 ntBASIC13.66□□□□□ -0.22
GFRA1P56159 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.66□□□□□ -0.22
GFRA1P56159 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.66□□□□□ -0.22
GFRA1P56159 POM121L9P-203ENST00000441984 1285 ntBASIC13.66□□□□□ -0.22
GFRA1P56159 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.66□□□□□ -0.22
GFRA1P56159 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.66□□□□□ -0.22
GFRA1P56159 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
GFRA1P56159 AL583810.1-201ENST00000553344 1045 ntBASIC13.66□□□□□ -0.22
GFRA1P56159 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.66□□□□□ -0.22
GFRA1P56159 AC023310.1-201ENST00000554836 735 ntBASIC13.66□□□□□ -0.22
GFRA1P56159 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.66□□□□□ -0.22
GFRA1P56159 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.66□□□□□ -0.22
GFRA1P56159 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.66□□□□□ -0.22
GFRA1P56159 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.66□□□□□ -0.22
GFRA1P56159 AC138035.3-201ENST00000622706 2791 ntBASIC13.66□□□□□ -0.22
GFRA1P56159 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
GFRA1P56159 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
GFRA1P56159 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
GFRA1P56159 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
GFRA1P56159 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.66□□□□□ -0.22
GFRA1P56159 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.66□□□□□ -0.22
GFRA1P56159 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.66□□□□□ -0.22
GFRA1P56159 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
GFRA1P56159 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
GFRA1P56159 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 AL109954.1-202ENST00000564051 2148 ntBASIC13.66□□□□□ -0.22
GFRA1P56159 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.66□□□□□ -0.22
GFRA1P56159 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
GFRA1P56159 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.66□□□□□ -0.22
GFRA1P56159 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.66□□□□□ -0.22
GFRA1P56159 AHCYP2-201ENST00000430630 1300 ntBASIC13.65□□□□□ -0.22
GFRA1P56159 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.65□□□□□ -0.22
GFRA1P56159 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
GFRA1P56159 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
GFRA1P56159 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
GFRA1P56159 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
GFRA1P56159 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
GFRA1P56159 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms