Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.4□□□□□ -0.26
FOXG1P55316 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
FOXG1P55316 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
FOXG1P55316 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
FOXG1P55316 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
FOXG1P55316 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.4□□□□□ -0.26
FOXG1P55316 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.4□□□□□ -0.26
FOXG1P55316 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
FOXG1P55316 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
FOXG1P55316 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
FOXG1P55316 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
FOXG1P55316 LINC00528-201ENST00000600723 2160 ntBASIC13.39□□□□□ -0.27
FOXG1P55316 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
FOXG1P55316 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
FOXG1P55316 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
FOXG1P55316 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.39□□□□□ -0.27
FOXG1P55316 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.39□□□□□ -0.27
FOXG1P55316 NFIC-211ENST00000641145 8399 ntBASIC13.39□□□□□ -0.27
FOXG1P55316 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.39□□□□□ -0.27
FOXG1P55316 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.39□□□□□ -0.27
FOXG1P55316 AL645937.2-201ENST00000396808 931 ntBASIC13.39□□□□□ -0.27
FOXG1P55316 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.39□□□□□ -0.27
FOXG1P55316 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.39□□□□□ -0.27
FOXG1P55316 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.39□□□□□ -0.27
FOXG1P55316 ATP5G2P4-201ENST00000442175 420 ntBASIC13.39□□□□□ -0.27
FOXG1P55316 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
FOXG1P55316 AC022210.1-201ENST00000449856 793 ntBASIC13.39□□□□□ -0.27
FOXG1P55316 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.39□□□□□ -0.27
FOXG1P55316 AC007551.1-201ENST00000457394 519 ntBASIC13.39□□□□□ -0.27
FOXG1P55316 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.39□□□□□ -0.27
FOXG1P55316 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.39□□□□□ -0.27
FOXG1P55316 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.39□□□□□ -0.27
FOXG1P55316 AC004466.1-201ENST00000599515 1080 ntBASIC13.39□□□□□ -0.27
FOXG1P55316 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.39□□□□□ -0.27
FOXG1P55316 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
FOXG1P55316 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.39□□□□□ -0.27
FOXG1P55316 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.39□□□□□ -0.27
FOXG1P55316 AC012508.2-201ENST00000567613 1472 ntBASIC13.39□□□□□ -0.27
FOXG1P55316 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.39□□□□□ -0.27
FOXG1P55316 AL137783.1-201ENST00000623494 1896 ntBASIC13.39□□□□□ -0.27
FOXG1P55316 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
FOXG1P55316 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
FOXG1P55316 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
FOXG1P55316 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
FOXG1P55316 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.38□□□□□ -0.27
FOXG1P55316 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
FOXG1P55316 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.38□□□□□ -0.27
FOXG1P55316 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.38□□□□□ -0.27
FOXG1P55316 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
FOXG1P55316 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.38□□□□□ -0.27
FOXG1P55316 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
FOXG1P55316 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
FOXG1P55316 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
FOXG1P55316 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
FOXG1P55316 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.38□□□□□ -0.27
FOXG1P55316 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.38□□□□□ -0.27
FOXG1P55316 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
FOXG1P55316 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.38□□□□□ -0.27
FOXG1P55316 AC234783.1-201ENST00000441761 496 ntBASIC13.38□□□□□ -0.27
FOXG1P55316 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 CTBP2P5-201ENST00000454986 1264 ntBASIC13.38□□□□□ -0.27
FOXG1P55316 AL590640.2-201ENST00000457038 527 ntBASIC13.38□□□□□ -0.27
FOXG1P55316 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
FOXG1P55316 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.38□□□□□ -0.27
FOXG1P55316 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms