Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.19■□□□□ 0.02
ZNF140P52738 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF140P52738 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF140P52738 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.19■□□□□ 0.02
ZNF140P52738 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF140P52738 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ZNF140P52738 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ZNF140P52738 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ZNF140P52738 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF140P52738 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ZNF140P52738 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
ZNF140P52738 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ZNF140P52738 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.19■□□□□ 0.02
ZNF140P52738 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.19■□□□□ 0.02
ZNF140P52738 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.18■□□□□ 0.02
ZNF140P52738 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.18■□□□□ 0.02
ZNF140P52738 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF140P52738 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF140P52738 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF140P52738 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF140P52738 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ZNF140P52738 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
ZNF140P52738 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.18■□□□□ 0.02
ZNF140P52738 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF140P52738 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.18■□□□□ 0.02
ZNF140P52738 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF140P52738 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
ZNF140P52738 ACTBP8-201ENST00000403258 1108 ntBASIC15.18■□□□□ 0.02
ZNF140P52738 EIF3FP3-201ENST00000434851 1086 ntBASIC15.18■□□□□ 0.02
ZNF140P52738 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF140P52738 AC093433.1-201ENST00000458048 571 ntBASIC15.18■□□□□ 0.02
ZNF140P52738 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.18■□□□□ 0.02
ZNF140P52738 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.18■□□□□ 0.02
ZNF140P52738 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF140P52738 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.18■□□□□ 0.02
ZNF140P52738 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ZNF140P52738 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.18■□□□□ 0.02
ZNF140P52738 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.18■□□□□ 0.02
ZNF140P52738 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF140P52738 CICP14-201ENST00000629111 2732 ntBASIC15.18■□□□□ 0.02
ZNF140P52738 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.18■□□□□ 0.02
ZNF140P52738 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.18■□□□□ 0.02
ZNF140P52738 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF140P52738 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF140P52738 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF140P52738 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF140P52738 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF140P52738 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF140P52738 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF140P52738 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.18■□□□□ 0.02
ZNF140P52738 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ZNF140P52738 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.17■□□□□ 0.02
ZNF140P52738 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.17■□□□□ 0.02
ZNF140P52738 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 AC023090.2-201ENST00000625182 2110 ntBASIC15.17■□□□□ 0.02
ZNF140P52738 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
ZNF140P52738 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 AC098614.1-201ENST00000368528 745 ntBASIC15.17■□□□□ 0.02
ZNF140P52738 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.17■□□□□ 0.02
ZNF140P52738 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
ZNF140P52738 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 AC022616.1-201ENST00000518688 554 ntBASIC15.17■□□□□ 0.02
ZNF140P52738 AC009486.1-201ENST00000569860 813 ntBASIC15.17■□□□□ 0.02
ZNF140P52738 MIR5189-201ENST00000577370 114 ntBASIC15.17■□□□□ 0.02
ZNF140P52738 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.17■□□□□ 0.02
ZNF140P52738 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.17■□□□□ 0.02
ZNF140P52738 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 AL513477.1-201ENST00000602865 2407 ntBASIC15.17■□□□□ 0.02
ZNF140P52738 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ZNF140P52738 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
ZNF140P52738 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
ZNF140P52738 MSTO2P-201ENST00000314835 1709 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms