Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RAB5CP51148 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB5CP51148 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
RAB5CP51148 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB5CP51148 AC117947.1-201ENST00000427448 529 ntBASIC12.37□□□□□ -0.43
RAB5CP51148 CHCHD2P8-201ENST00000429873 447 ntBASIC12.37□□□□□ -0.43
RAB5CP51148 KRT17P6-201ENST00000453795 1220 ntBASIC12.37□□□□□ -0.43
RAB5CP51148 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RAB5CP51148 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB5CP51148 MIR4497-201ENST00000583208 89 ntBASIC12.37□□□□□ -0.43
RAB5CP51148 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB5CP51148 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
RAB5CP51148 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.37□□□□□ -0.43
RAB5CP51148 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB5CP51148 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB5CP51148 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB5CP51148 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.37□□□□□ -0.43
RAB5CP51148 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB5CP51148 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
RAB5CP51148 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.37□□□□□ -0.43
RAB5CP51148 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB5CP51148 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.37□□□□□ -0.43
RAB5CP51148 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RAB5CP51148 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB5CP51148 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB5CP51148 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB5CP51148 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 CSPG4P11-201ENST00000560634 4910 ntBASIC12.36□□□□□ -0.43
RAB5CP51148 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
RAB5CP51148 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RAB5CP51148 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB5CP51148 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
RAB5CP51148 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
RAB5CP51148 AL118506.1-201ENST00000601296 3082 ntBASIC12.36□□□□□ -0.43
RAB5CP51148 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.36□□□□□ -0.43
RAB5CP51148 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
RAB5CP51148 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
RAB5CP51148 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
RAB5CP51148 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB5CP51148 AC004987.2-201ENST00000395959 1148 ntBASIC12.36□□□□□ -0.43
RAB5CP51148 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.36□□□□□ -0.43
RAB5CP51148 AC092647.4-201ENST00000457211 535 ntBASIC12.36□□□□□ -0.43
RAB5CP51148 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.36□□□□□ -0.43
RAB5CP51148 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.36□□□□□ -0.43
RAB5CP51148 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
RAB5CP51148 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB5CP51148 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
RAB5CP51148 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RAB5CP51148 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RAB5CP51148 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB5CP51148 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC12.36□□□□□ -0.43
RAB5CP51148 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RAB5CP51148 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.35□□□□□ -0.43
RAB5CP51148 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms