Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.33□□□□□ -0.59
CKS2P33552 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
CKS2P33552 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
CKS2P33552 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
CKS2P33552 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.33□□□□□ -0.6
CKS2P33552 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC11.33□□□□□ -0.6
CKS2P33552 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
CKS2P33552 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC11.33□□□□□ -0.6
CKS2P33552 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC11.33□□□□□ -0.6
CKS2P33552 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 PHKG1P2-201ENST00000457537 863 ntBASIC11.33□□□□□ -0.6
CKS2P33552 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC11.33□□□□□ -0.6
CKS2P33552 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.33□□□□□ -0.6
CKS2P33552 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC11.33□□□□□ -0.6
CKS2P33552 PPOX-219ENST00000544598 813 ntTSL 2 BASIC11.33□□□□□ -0.6
CKS2P33552 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.33□□□□□ -0.6
CKS2P33552 CYGB-205ENST00000590175 830 ntTSL 3 BASIC11.33□□□□□ -0.6
CKS2P33552 AC011467.4-201ENST00000594891 528 ntBASIC11.33□□□□□ -0.6
CKS2P33552 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC11.33□□□□□ -0.6
CKS2P33552 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC11.33□□□□□ -0.6
CKS2P33552 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
CKS2P33552 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
CKS2P33552 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
CKS2P33552 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CKS2P33552 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 CICP20-201ENST00000443330 2801 ntBASIC11.33□□□□□ -0.6
CKS2P33552 CICP8-201ENST00000455800 2813 ntBASIC11.33□□□□□ -0.6
CKS2P33552 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CKS2P33552 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.6
CKS2P33552 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
CKS2P33552 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
CKS2P33552 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
CKS2P33552 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC11.33□□□□□ -0.6
CKS2P33552 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC11.33□□□□□ -0.6
CKS2P33552 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
CKS2P33552 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.32□□□□□ -0.6
CKS2P33552 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC11.32□□□□□ -0.6
CKS2P33552 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 IER3-202ENST00000376377 1350 ntBASIC11.32□□□□□ -0.6
CKS2P33552 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
CKS2P33552 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC11.32□□□□□ -0.6
CKS2P33552 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC11.32□□□□□ -0.6
CKS2P33552 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
CKS2P33552 AC073621.1-201ENST00000392730 636 ntBASIC11.32□□□□□ -0.6
CKS2P33552 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC11.32□□□□□ -0.6
CKS2P33552 PCED1CP-201ENST00000419887 785 ntBASIC11.32□□□□□ -0.6
CKS2P33552 KRT18P27-201ENST00000427733 1299 ntBASIC11.32□□□□□ -0.6
CKS2P33552 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.32□□□□□ -0.6
CKS2P33552 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.32□□□□□ -0.6
CKS2P33552 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CKS2P33552 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms