Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTGFP29279 AC013726.1-201ENST00000563747 2285 ntBASIC16.86■□□□□ 0.29
CTGFP29279 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.86■□□□□ 0.29
CTGFP29279 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CTGFP29279 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTGFP29279 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.86■□□□□ 0.29
CTGFP29279 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTGFP29279 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CTGFP29279 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTGFP29279 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTGFP29279 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTGFP29279 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CTGFP29279 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTGFP29279 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTGFP29279 KRT18P36-201ENST00000411618 1276 ntBASIC16.86■□□□□ 0.29
CTGFP29279 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC16.86■□□□□ 0.29
CTGFP29279 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.86■□□□□ 0.29
CTGFP29279 XBP1P1-201ENST00000436573 652 ntBASIC16.86■□□□□ 0.29
CTGFP29279 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CTGFP29279 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.86■□□□□ 0.29
CTGFP29279 ORAOV1P1-201ENST00000503108 395 ntBASIC16.86■□□□□ 0.29
CTGFP29279 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CTGFP29279 AP003398.1-201ENST00000531124 318 ntBASIC16.86■□□□□ 0.29
CTGFP29279 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC16.86■□□□□ 0.29
CTGFP29279 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CTGFP29279 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CTGFP29279 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
CTGFP29279 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.86■□□□□ 0.29
CTGFP29279 AC087392.5-201ENST00000612517 489 ntBASIC16.86■□□□□ 0.29
CTGFP29279 FO393412.1-201ENST00000619841 382 ntBASIC16.86■□□□□ 0.29
CTGFP29279 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CTGFP29279 AC018629.1-201ENST00000623381 1736 ntBASIC16.86■□□□□ 0.29
CTGFP29279 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.86■□□□□ 0.29
CTGFP29279 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.86■□□□□ 0.29
CTGFP29279 KRT18P9-201ENST00000604826 1300 ntBASIC16.86■□□□□ 0.29
CTGFP29279 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC16.86■□□□□ 0.29
CTGFP29279 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTGFP29279 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC16.86■□□□□ 0.29
CTGFP29279 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTGFP29279 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.86■□□□□ 0.29
CTGFP29279 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTGFP29279 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTGFP29279 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CTGFP29279 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
CTGFP29279 REXO1L2P-201ENST00000425429 2069 ntBASIC16.85■□□□□ 0.29
CTGFP29279 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.85■□□□□ 0.29
CTGFP29279 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.85■□□□□ 0.29
CTGFP29279 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CTGFP29279 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.85■□□□□ 0.29
CTGFP29279 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CTGFP29279 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.85■□□□□ 0.29
CTGFP29279 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC16.85■□□□□ 0.29
CTGFP29279 FAU-202ENST00000434372 533 ntTSL 2 BASIC16.85■□□□□ 0.29
CTGFP29279 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.85■□□□□ 0.29
CTGFP29279 AC004837.1-201ENST00000446267 564 ntBASIC16.85■□□□□ 0.29
CTGFP29279 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 RN7SL396P-201ENST00000471086 295 ntBASIC16.85■□□□□ 0.29
CTGFP29279 ALG3P1-201ENST00000508806 1114 ntBASIC16.85■□□□□ 0.29
CTGFP29279 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC16.85■□□□□ 0.29
CTGFP29279 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.85■□□□□ 0.29
CTGFP29279 MIR3188-201ENST00000583494 85 ntBASIC16.85■□□□□ 0.29
CTGFP29279 AC133540.1-201ENST00000620845 1019 ntBASIC16.85■□□□□ 0.29
CTGFP29279 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.85■□□□□ 0.29
CTGFP29279 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
CTGFP29279 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CTGFP29279 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CTGFP29279 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.85■□□□□ 0.29
CTGFP29279 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTGFP29279 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CTGFP29279 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTGFP29279 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTGFP29279 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.84■□□□□ 0.29
CTGFP29279 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.84■□□□□ 0.29
CTGFP29279 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTGFP29279 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTGFP29279 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTGFP29279 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms