Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
COL8A2P25067 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
COL8A2P25067 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
COL8A2P25067 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
COL8A2P25067 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.95□□□□□ -0.34
COL8A2P25067 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
COL8A2P25067 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC12.94□□□□□ -0.34
COL8A2P25067 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
COL8A2P25067 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
COL8A2P25067 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.94□□□□□ -0.34
COL8A2P25067 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
COL8A2P25067 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.94□□□□□ -0.34
COL8A2P25067 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
COL8A2P25067 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
COL8A2P25067 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
COL8A2P25067 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.94□□□□□ -0.34
COL8A2P25067 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
COL8A2P25067 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
COL8A2P25067 KLF2P2-201ENST00000416807 1039 ntBASIC12.94□□□□□ -0.34
COL8A2P25067 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.94□□□□□ -0.34
COL8A2P25067 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
COL8A2P25067 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.94□□□□□ -0.34
COL8A2P25067 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.94□□□□□ -0.34
COL8A2P25067 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.94□□□□□ -0.34
COL8A2P25067 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.94□□□□□ -0.34
COL8A2P25067 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.94□□□□□ -0.34
COL8A2P25067 AC025279.2-201ENST00000569730 653 ntBASIC12.94□□□□□ -0.34
COL8A2P25067 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.94□□□□□ -0.34
COL8A2P25067 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.94□□□□□ -0.34
COL8A2P25067 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.94□□□□□ -0.34
COL8A2P25067 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.94□□□□□ -0.34
COL8A2P25067 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.94□□□□□ -0.34
COL8A2P25067 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.94□□□□□ -0.34
COL8A2P25067 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
COL8A2P25067 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.94□□□□□ -0.34
COL8A2P25067 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.94□□□□□ -0.34
COL8A2P25067 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
COL8A2P25067 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
COL8A2P25067 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.94□□□□□ -0.34
COL8A2P25067 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 REXO1L6P-201ENST00000603433 1515 ntBASIC12.93□□□□□ -0.34
COL8A2P25067 FLJ16779-201ENST00000612722 7638 ntBASIC12.93□□□□□ -0.34
COL8A2P25067 SNX18-202ENST00000343017 3140 ntBASIC12.93□□□□□ -0.34
COL8A2P25067 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
COL8A2P25067 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
COL8A2P25067 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
COL8A2P25067 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
COL8A2P25067 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.93□□□□□ -0.34
COL8A2P25067 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
COL8A2P25067 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.93□□□□□ -0.34
COL8A2P25067 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
COL8A2P25067 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
COL8A2P25067 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
COL8A2P25067 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
COL8A2P25067 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.93□□□□□ -0.34
COL8A2P25067 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.93□□□□□ -0.34
COL8A2P25067 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.93□□□□□ -0.34
COL8A2P25067 NUS1P3-201ENST00000423502 862 ntBASIC12.93□□□□□ -0.34
COL8A2P25067 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms