Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 FAM45BP-202ENST00000592932 1624 ntBASIC14.56□□□□□ -0.08
MMP11P24347 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.56□□□□□ -0.08
MMP11P24347 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
MMP11P24347 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.56□□□□□ -0.08
MMP11P24347 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP11P24347 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP11P24347 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP11P24347 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 BAATP1-201ENST00000412284 1225 ntBASIC14.56□□□□□ -0.08
MMP11P24347 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.56□□□□□ -0.08
MMP11P24347 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
MMP11P24347 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP11P24347 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.56□□□□□ -0.08
MMP11P24347 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP11P24347 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
MMP11P24347 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
MMP11P24347 AP001889.1-201ENST00000525414 633 ntBASIC14.56□□□□□ -0.08
MMP11P24347 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 SNX29P1-201ENST00000548357 1007 ntBASIC14.56□□□□□ -0.08
MMP11P24347 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.56□□□□□ -0.08
MMP11P24347 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.56□□□□□ -0.08
MMP11P24347 MIR4259-201ENST00000584466 101 ntBASIC14.56□□□□□ -0.08
MMP11P24347 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
MMP11P24347 AC005252.2-201ENST00000624630 1141 ntBASIC14.56□□□□□ -0.08
MMP11P24347 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP11P24347 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP11P24347 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.56□□□□□ -0.08
MMP11P24347 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.56□□□□□ -0.08
MMP11P24347 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
MMP11P24347 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
MMP11P24347 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.56□□□□□ -0.08
MMP11P24347 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP11P24347 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP11P24347 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP11P24347 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
MMP11P24347 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
MMP11P24347 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 ACKR1-201ENST00000368121 1240 ntBASIC14.55□□□□□ -0.08
MMP11P24347 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
MMP11P24347 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.55□□□□□ -0.08
MMP11P24347 AC012441.1-201ENST00000446669 685 ntBASIC14.55□□□□□ -0.08
MMP11P24347 BCRP2-202ENST00000447763 634 ntBASIC14.55□□□□□ -0.08
MMP11P24347 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
MMP11P24347 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP11P24347 BCRP6-201ENST00000510112 632 ntBASIC14.55□□□□□ -0.08
MMP11P24347 BCRP7-201ENST00000511549 544 ntBASIC14.55□□□□□ -0.08
MMP11P24347 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
MMP11P24347 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.55□□□□□ -0.08
MMP11P24347 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
MMP11P24347 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.55□□□□□ -0.08
MMP11P24347 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.55□□□□□ -0.08
MMP11P24347 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP11P24347 AC106881.1-201ENST00000605849 3329 ntBASIC14.55□□□□□ -0.08
MMP11P24347 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
MMP11P24347 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.55□□□□□ -0.08
MMP11P24347 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.55□□□□□ -0.08
MMP11P24347 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms