Protein–RNA interactions for Protein: O94876

TMCC1, Transmembrane and coiled-coil domains protein 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1O94876 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.8■□□□□ 0.12
TMCC1O94876 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.8■□□□□ 0.12
TMCC1O94876 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.8■□□□□ 0.12
TMCC1O94876 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.8■□□□□ 0.12
TMCC1O94876 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.8■□□□□ 0.12
TMCC1O94876 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC1O94876 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TMCC1O94876 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TMCC1O94876 AC025181.2-201ENST00000606994 802 ntBASIC15.8■□□□□ 0.12
TMCC1O94876 AC012645.4-201ENST00000610691 1061 ntBASIC15.8■□□□□ 0.12
TMCC1O94876 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
TMCC1O94876 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.8■□□□□ 0.12
TMCC1O94876 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.8■□□□□ 0.12
TMCC1O94876 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC1O94876 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC1O94876 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.8■□□□□ 0.12
TMCC1O94876 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC1O94876 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.8■□□□□ 0.12
TMCC1O94876 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC1O94876 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC1O94876 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC1O94876 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC1O94876 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC1O94876 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC1O94876 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC1O94876 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TMCC1O94876 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TMCC1O94876 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TMCC1O94876 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC1O94876 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMCC1O94876 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TMCC1O94876 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TMCC1O94876 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.79■□□□□ 0.12
TMCC1O94876 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TMCC1O94876 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.79■□□□□ 0.12
TMCC1O94876 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.79■□□□□ 0.12
TMCC1O94876 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.79■□□□□ 0.12
TMCC1O94876 AC026748.1-201ENST00000624349 3251 ntBASIC15.79■□□□□ 0.12
TMCC1O94876 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TMCC1O94876 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.79■□□□□ 0.12
TMCC1O94876 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.79■□□□□ 0.12
TMCC1O94876 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.79■□□□□ 0.12
TMCC1O94876 AC120045.2-201ENST00000567334 178 ntBASIC15.79■□□□□ 0.12
TMCC1O94876 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.79■□□□□ 0.12
TMCC1O94876 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TMCC1O94876 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.79■□□□□ 0.12
TMCC1O94876 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.79■□□□□ 0.12
TMCC1O94876 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.79■□□□□ 0.12
TMCC1O94876 AC013268.4-201ENST00000637413 2228 ntBASIC15.79■□□□□ 0.12
TMCC1O94876 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TMCC1O94876 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TMCC1O94876 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMCC1O94876 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.78■□□□□ 0.12
TMCC1O94876 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC1O94876 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC1O94876 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC1O94876 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.78■□□□□ 0.12
TMCC1O94876 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC1O94876 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC1O94876 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TMCC1O94876 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC1O94876 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC1O94876 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC1O94876 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC1O94876 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TMCC1O94876 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TMCC1O94876 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC1O94876 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.78■□□□□ 0.12
TMCC1O94876 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC1O94876 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.78■□□□□ 0.12
TMCC1O94876 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TMCC1O94876 COX5BP8-201ENST00000416911 349 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms