Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 AC055811.4-201ENST00000624039 1754 ntBASIC17.45■□□□□ 0.38
ATP2A1O14983 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ATP2A1O14983 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.45■□□□□ 0.38
ATP2A1O14983 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 AL391005.1-201ENST00000623953 2435 ntBASIC17.45■□□□□ 0.38
ATP2A1O14983 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATP2A1O14983 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A1O14983 AC046158.3-201ENST00000624947 2558 ntBASIC17.44■□□□□ 0.38
ATP2A1O14983 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A1O14983 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ATP2A1O14983 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP2A1O14983 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP2A1O14983 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A1O14983 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A1O14983 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A1O14983 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP2A1O14983 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A1O14983 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A1O14983 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A1O14983 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
ATP2A1O14983 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A1O14983 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP2A1O14983 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A1O14983 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP2A1O14983 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.44■□□□□ 0.38
ATP2A1O14983 FTLP10-202ENST00000505798 471 ntBASIC17.44■□□□□ 0.38
ATP2A1O14983 AL391280.1-201ENST00000506969 1062 ntBASIC17.44■□□□□ 0.38
ATP2A1O14983 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP2A1O14983 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.44■□□□□ 0.38
ATP2A1O14983 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A1O14983 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.44■□□□□ 0.38
ATP2A1O14983 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A1O14983 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A1O14983 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
ATP2A1O14983 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATP2A1O14983 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A1O14983 CLUHP2-201ENST00000426660 1303 ntBASIC17.44■□□□□ 0.38
ATP2A1O14983 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.44■□□□□ 0.38
ATP2A1O14983 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A1O14983 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A1O14983 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A1O14983 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATP2A1O14983 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ATP2A1O14983 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATP2A1O14983 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ATP2A1O14983 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
ATP2A1O14983 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ATP2A1O14983 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.43■□□□□ 0.38
ATP2A1O14983 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.43■□□□□ 0.38
ATP2A1O14983 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.43■□□□□ 0.38
ATP2A1O14983 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.43■□□□□ 0.38
ATP2A1O14983 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.43■□□□□ 0.38
ATP2A1O14983 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 AL136309.1-201ENST00000403917 691 ntBASIC17.43■□□□□ 0.38
ATP2A1O14983 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.43■□□□□ 0.38
ATP2A1O14983 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 AC126915.1-201ENST00000522847 1038 ntBASIC17.43■□□□□ 0.38
ATP2A1O14983 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC17.43■□□□□ 0.38
ATP2A1O14983 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.43■□□□□ 0.38
ATP2A1O14983 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.43■□□□□ 0.38
ATP2A1O14983 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.43■□□□□ 0.38
ATP2A1O14983 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.43■□□□□ 0.38
ATP2A1O14983 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATP2A1O14983 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.43■□□□□ 0.38
ATP2A1O14983 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ATP2A1O14983 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.43■□□□□ 0.38
ATP2A1O14983 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.43■□□□□ 0.38
ATP2A1O14983 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.43■□□□□ 0.38
ATP2A1O14983 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ATP2A1O14983 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
ATP2A1O14983 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATP2A1O14983 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ATP2A1O14983 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms