Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.25■□□□□ 0.19
CAPN9O14815 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN9O14815 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CAPN9O14815 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN9O14815 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN9O14815 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN9O14815 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.25■□□□□ 0.19
CAPN9O14815 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.25■□□□□ 0.19
CAPN9O14815 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CAPN9O14815 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
CAPN9O14815 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPN9O14815 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 SNX18-202ENST00000343017 3140 ntBASIC16.24■□□□□ 0.19
CAPN9O14815 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPN9O14815 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CAPN9O14815 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CAPN9O14815 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPN9O14815 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.24■□□□□ 0.19
CAPN9O14815 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.24■□□□□ 0.19
CAPN9O14815 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.24■□□□□ 0.19
CAPN9O14815 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CAPN9O14815 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPN9O14815 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.24■□□□□ 0.19
CAPN9O14815 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CAPN9O14815 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CAPN9O14815 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPN9O14815 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPN9O14815 AC138035.3-201ENST00000622706 2791 ntBASIC16.23■□□□□ 0.19
CAPN9O14815 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPN9O14815 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CAPN9O14815 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 AC098850.1-201ENST00000419919 790 ntBASIC16.23■□□□□ 0.19
CAPN9O14815 AC134915.1-201ENST00000426461 574 ntBASIC16.23■□□□□ 0.19
CAPN9O14815 VDAC1P7-201ENST00000462417 847 ntBASIC16.23■□□□□ 0.19
CAPN9O14815 AC092552.1-201ENST00000547243 906 ntBASIC16.23■□□□□ 0.19
CAPN9O14815 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 CR383656.12-201ENST00000549567 513 ntBASIC16.23■□□□□ 0.19
CAPN9O14815 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.23■□□□□ 0.19
CAPN9O14815 TMEM261P1-201ENST00000604899 340 ntBASIC16.23■□□□□ 0.19
CAPN9O14815 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPN9O14815 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPN9O14815 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.23■□□□□ 0.19
CAPN9O14815 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
CAPN9O14815 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CAPN9O14815 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPN9O14815 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.23■□□□□ 0.19
CAPN9O14815 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CAPN9O14815 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CAPN9O14815 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.23■□□□□ 0.19
CAPN9O14815 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CAPN9O14815 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.23■□□□□ 0.19
CAPN9O14815 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CAPN9O14815 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CAPN9O14815 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CAPN9O14815 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN9O14815 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN9O14815 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.22■□□□□ 0.19
CAPN9O14815 PPT1-215ENST00000641471 2368 ntBASIC16.22■□□□□ 0.19
CAPN9O14815 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN9O14815 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN9O14815 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.22■□□□□ 0.19
CAPN9O14815 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CAPN9O14815 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms