Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM235A6NFC5 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TMEM235A6NFC5 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.15□□□□□ -0.3
TMEM235A6NFC5 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.15□□□□□ -0.3
TMEM235A6NFC5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TMEM235A6NFC5 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.15□□□□□ -0.31
TMEM235A6NFC5 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
TMEM235A6NFC5 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 BEND3P1-201ENST00000421591 1944 ntBASIC13.14□□□□□ -0.31
TMEM235A6NFC5 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 MIR346-201ENST00000362234 95 ntBASIC13.14□□□□□ -0.31
TMEM235A6NFC5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 AC145285.3-201ENST00000564603 959 ntBASIC13.14□□□□□ -0.31
TMEM235A6NFC5 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 AC091812.2-201ENST00000619081 385 ntBASIC13.14□□□□□ -0.31
TMEM235A6NFC5 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.14□□□□□ -0.31
TMEM235A6NFC5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 AC092865.6-201ENST00000642101 219 ntBASIC13.14□□□□□ -0.31
TMEM235A6NFC5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TMEM235A6NFC5 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 REXO1L4P-201ENST00000605109 1937 ntBASIC13.13□□□□□ -0.31
TMEM235A6NFC5 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 FAM86C2P-203ENST00000528684 1004 ntBASIC13.13□□□□□ -0.31
TMEM235A6NFC5 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM235A6NFC5 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms