Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 KRT18P64-201ENST00000434946 1219 ntBASIC13.36□□□□□ -0.27
SHISA3A0PJX4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 AC022447.6-201ENST00000515522 438 ntBASIC13.36□□□□□ -0.27
SHISA3A0PJX4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.36□□□□□ -0.27
SHISA3A0PJX4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 AC025181.2-201ENST00000606994 802 ntBASIC13.36□□□□□ -0.27
SHISA3A0PJX4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 AL645728.2-202ENST00000641679 227 ntBASIC13.36□□□□□ -0.27
SHISA3A0PJX4 AC092865.6-201ENST00000642101 219 ntBASIC13.36□□□□□ -0.27
SHISA3A0PJX4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SHISA3A0PJX4 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.35□□□□□ -0.27
SHISA3A0PJX4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 AC007967.2-201ENST00000432613 625 ntBASIC13.35□□□□□ -0.27
SHISA3A0PJX4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 AC034105.1-201ENST00000563488 319 ntBASIC13.35□□□□□ -0.27
SHISA3A0PJX4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SHISA3A0PJX4 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SHISA3A0PJX4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms