Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHA2Q9Y5H9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.99■■□□□ 1.75
PCDHA2Q9Y5H9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHA2Q9Y5H9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHA2Q9Y5H9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA2Q9Y5H9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA2Q9Y5H9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA2Q9Y5H9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDHA2Q9Y5H9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA2Q9Y5H9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
PCDHA2Q9Y5H9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA2Q9Y5H9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.97■■□□□ 1.75
PCDHA2Q9Y5H9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC25.97■■□□□ 1.75
PCDHA2Q9Y5H9 MTDHP2-201ENST00000601468 714 ntBASIC25.97■■□□□ 1.75
PCDHA2Q9Y5H9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.96■■□□□ 1.75
PCDHA2Q9Y5H9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.96■■□□□ 1.75
PCDHA2Q9Y5H9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.96■■□□□ 1.75
PCDHA2Q9Y5H9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.96■■□□□ 1.75
PCDHA2Q9Y5H9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC25.96■■□□□ 1.75
PCDHA2Q9Y5H9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.96■■□□□ 1.75
PCDHA2Q9Y5H9 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.96■■□□□ 1.75
PCDHA2Q9Y5H9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC25.96■■□□□ 1.75
PCDHA2Q9Y5H9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.96■■□□□ 1.75
PCDHA2Q9Y5H9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.96■■□□□ 1.75
PCDHA2Q9Y5H9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA2Q9Y5H9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.96■■□□□ 1.75
PCDHA2Q9Y5H9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PCDHA2Q9Y5H9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
PCDHA2Q9Y5H9 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.95■■□□□ 1.74
PCDHA2Q9Y5H9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.95■■□□□ 1.74
PCDHA2Q9Y5H9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA2Q9Y5H9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.95■■□□□ 1.74
PCDHA2Q9Y5H9 MIR6724-1-201ENST00000616420 92 ntBASIC25.95■■□□□ 1.74
PCDHA2Q9Y5H9 MIR6724-2-201ENST00000616483 92 ntBASIC25.95■■□□□ 1.74
PCDHA2Q9Y5H9 MIR6724-4-201ENST00000617390 92 ntBASIC25.95■■□□□ 1.74
PCDHA2Q9Y5H9 MIR6724-3-201ENST00000622482 92 ntBASIC25.95■■□□□ 1.74
PCDHA2Q9Y5H9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA2Q9Y5H9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA2Q9Y5H9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA2Q9Y5H9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA2Q9Y5H9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.95■■□□□ 1.74
PCDHA2Q9Y5H9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA2Q9Y5H9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA2Q9Y5H9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHA2Q9Y5H9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHA2Q9Y5H9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHA2Q9Y5H9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHA2Q9Y5H9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHA2Q9Y5H9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.94■■□□□ 1.74
PCDHA2Q9Y5H9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.94■■□□□ 1.74
PCDHA2Q9Y5H9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.94■■□□□ 1.74
PCDHA2Q9Y5H9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.94■■□□□ 1.74
PCDHA2Q9Y5H9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.94■■□□□ 1.74
PCDHA2Q9Y5H9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC25.94■■□□□ 1.74
PCDHA2Q9Y5H9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
PCDHA2Q9Y5H9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.93■■□□□ 1.74
PCDHA2Q9Y5H9 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHA2Q9Y5H9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
PCDHA2Q9Y5H9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC25.92■■□□□ 1.74
PCDHA2Q9Y5H9 AL117332.1-201ENST00000622628 974 ntBASIC25.92■■□□□ 1.74
PCDHA2Q9Y5H9 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA2Q9Y5H9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA2Q9Y5H9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA2Q9Y5H9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.91■■□□□ 1.74
PCDHA2Q9Y5H9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.91■■□□□ 1.74
PCDHA2Q9Y5H9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHA2Q9Y5H9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHA2Q9Y5H9 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
PCDHA2Q9Y5H9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA2Q9Y5H9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.9■■□□□ 1.74
PCDHA2Q9Y5H9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA2Q9Y5H9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA2Q9Y5H9 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.9■■□□□ 1.74
PCDHA2Q9Y5H9 MIR3621-201ENST00000580529 85 ntBASIC25.9■■□□□ 1.74
PCDHA2Q9Y5H9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA2Q9Y5H9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA2Q9Y5H9 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA2Q9Y5H9 AC093323.1-202ENST00000635031 2045 ntBASIC25.9■■□□□ 1.74
PCDHA2Q9Y5H9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
PCDHA2Q9Y5H9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHA2Q9Y5H9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
PCDHA2Q9Y5H9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.89■■□□□ 1.74
PCDHA2Q9Y5H9 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA2Q9Y5H9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA2Q9Y5H9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.88■■□□□ 1.73
PCDHA2Q9Y5H9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA2Q9Y5H9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
PCDHA2Q9Y5H9 AC019069.1-201ENST00000610008 1333 ntBASIC25.88■■□□□ 1.73
PCDHA2Q9Y5H9 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA2Q9Y5H9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.87■■□□□ 1.73
PCDHA2Q9Y5H9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
PCDHA2Q9Y5H9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.87■■□□□ 1.73
PCDHA2Q9Y5H9 AC131281.2-201ENST00000520478 145 ntBASIC25.87■■□□□ 1.73
PCDHA2Q9Y5H9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.87■■□□□ 1.73
PCDHA2Q9Y5H9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.87■■□□□ 1.73
PCDHA2Q9Y5H9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA2Q9Y5H9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA2Q9Y5H9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA2Q9Y5H9 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
PCDHA2Q9Y5H9 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 404.2 ms