Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB1Q9Y5F3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB1Q9Y5F3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
PCDHB1Q9Y5F3 AC090877.2-201ENST00000558441 1738 ntBASIC23.12■■□□□ 1.29
PCDHB1Q9Y5F3 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB1Q9Y5F3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB1Q9Y5F3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
PCDHB1Q9Y5F3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHB1Q9Y5F3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB1Q9Y5F3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
PCDHB1Q9Y5F3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHB1Q9Y5F3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB1Q9Y5F3 TSPY9P-201ENST00000440215 945 ntBASIC23.11■■□□□ 1.29
PCDHB1Q9Y5F3 TSPY11P-201ENST00000442607 1045 ntBASIC23.11■■□□□ 1.29
PCDHB1Q9Y5F3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.11■■□□□ 1.29
PCDHB1Q9Y5F3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHB1Q9Y5F3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHB1Q9Y5F3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHB1Q9Y5F3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDHB1Q9Y5F3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB1Q9Y5F3 AC141586.4-201ENST00000624558 1573 ntBASIC23.1■■□□□ 1.29
PCDHB1Q9Y5F3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB1Q9Y5F3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB1Q9Y5F3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
PCDHB1Q9Y5F3 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB1Q9Y5F3 KRT18P24-201ENST00000344739 1156 ntBASIC23.1■■□□□ 1.29
PCDHB1Q9Y5F3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB1Q9Y5F3 LINC01124-201ENST00000409786 2117 ntBASIC23.1■■□□□ 1.29
PCDHB1Q9Y5F3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDHB1Q9Y5F3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB1Q9Y5F3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB1Q9Y5F3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHB1Q9Y5F3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB1Q9Y5F3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB1Q9Y5F3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB1Q9Y5F3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB1Q9Y5F3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB1Q9Y5F3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB1Q9Y5F3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB1Q9Y5F3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PCDHB1Q9Y5F3 AC093323.1-202ENST00000635031 2045 ntBASIC23.09■■□□□ 1.29
PCDHB1Q9Y5F3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB1Q9Y5F3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHB1Q9Y5F3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB1Q9Y5F3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.08■■□□□ 1.29
PCDHB1Q9Y5F3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB1Q9Y5F3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHB1Q9Y5F3 LINC00543-201ENST00000567234 1845 ntBASIC23.08■■□□□ 1.28
PCDHB1Q9Y5F3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB1Q9Y5F3 MIR638-201ENST00000385237 100 ntBASIC23.07■■□□□ 1.28
PCDHB1Q9Y5F3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHB1Q9Y5F3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHB1Q9Y5F3 HLA-L-211ENST00000482052 1765 ntBASIC23.06■■□□□ 1.28
PCDHB1Q9Y5F3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDHB1Q9Y5F3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB1Q9Y5F3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PCDHB1Q9Y5F3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB1Q9Y5F3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB1Q9Y5F3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDHB1Q9Y5F3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDHB1Q9Y5F3 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHB1Q9Y5F3 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB1Q9Y5F3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB1Q9Y5F3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB1Q9Y5F3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
PCDHB1Q9Y5F3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.05■■□□□ 1.28
PCDHB1Q9Y5F3 AC137630.3-201ENST00000607245 391 ntBASIC23.05■■□□□ 1.28
PCDHB1Q9Y5F3 AC011551.1-201ENST00000614101 683 ntBASIC23.05■■□□□ 1.28
PCDHB1Q9Y5F3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHB1Q9Y5F3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHB1Q9Y5F3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHB1Q9Y5F3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB1Q9Y5F3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB1Q9Y5F3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB1Q9Y5F3 AC120024.1-201ENST00000562672 995 ntBASIC23.04■■□□□ 1.28
PCDHB1Q9Y5F3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.04■■□□□ 1.28
PCDHB1Q9Y5F3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHB1Q9Y5F3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB1Q9Y5F3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
PCDHB1Q9Y5F3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB1Q9Y5F3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHB1Q9Y5F3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHB1Q9Y5F3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB1Q9Y5F3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB1Q9Y5F3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB1Q9Y5F3 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB1Q9Y5F3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB1Q9Y5F3 AC021242.3-201ENST00000607598 1377 ntBASIC23.02■■□□□ 1.28
PCDHB1Q9Y5F3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB1Q9Y5F3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
PCDHB1Q9Y5F3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.02■■□□□ 1.28
PCDHB1Q9Y5F3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB1Q9Y5F3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.02■■□□□ 1.28
PCDHB1Q9Y5F3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.02■■□□□ 1.28
PCDHB1Q9Y5F3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.02■■□□□ 1.28
PCDHB1Q9Y5F3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB1Q9Y5F3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB1Q9Y5F3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB1Q9Y5F3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB1Q9Y5F3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms