Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB11Q9Y5F2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB11Q9Y5F2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB11Q9Y5F2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDHB11Q9Y5F2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PCDHB11Q9Y5F2 MIR6089-201ENST00000616698 64 ntBASIC22.62■■□□□ 1.21
PCDHB11Q9Y5F2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
PCDHB11Q9Y5F2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB11Q9Y5F2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB11Q9Y5F2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB11Q9Y5F2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB11Q9Y5F2 AC092028.1-203ENST00000608262 953 ntBASIC22.61■■□□□ 1.21
PCDHB11Q9Y5F2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDHB11Q9Y5F2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB11Q9Y5F2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB11Q9Y5F2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDHB11Q9Y5F2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB11Q9Y5F2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDHB11Q9Y5F2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
PCDHB11Q9Y5F2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHB11Q9Y5F2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
PCDHB11Q9Y5F2 MIR4281-201ENST00000580852 62 ntBASIC22.6■■□□□ 1.21
PCDHB11Q9Y5F2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDHB11Q9Y5F2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDHB11Q9Y5F2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDHB11Q9Y5F2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDHB11Q9Y5F2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDHB11Q9Y5F2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.6■■□□□ 1.21
PCDHB11Q9Y5F2 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB11Q9Y5F2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.59■■□□□ 1.21
PCDHB11Q9Y5F2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
PCDHB11Q9Y5F2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB11Q9Y5F2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDHB11Q9Y5F2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDHB11Q9Y5F2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
PCDHB11Q9Y5F2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDHB11Q9Y5F2 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.58■■□□□ 1.21
PCDHB11Q9Y5F2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
PCDHB11Q9Y5F2 AL139125.2-201ENST00000623134 1869 ntBASIC22.58■■□□□ 1.2
PCDHB11Q9Y5F2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB11Q9Y5F2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.57■■□□□ 1.2
PCDHB11Q9Y5F2 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHB11Q9Y5F2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PCDHB11Q9Y5F2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.57■■□□□ 1.2
PCDHB11Q9Y5F2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHB11Q9Y5F2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDHB11Q9Y5F2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB11Q9Y5F2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB11Q9Y5F2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB11Q9Y5F2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB11Q9Y5F2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.56■■□□□ 1.2
PCDHB11Q9Y5F2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.56■■□□□ 1.2
PCDHB11Q9Y5F2 AL139246.5-201ENST00000606645 996 ntBASIC22.56■■□□□ 1.2
PCDHB11Q9Y5F2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
PCDHB11Q9Y5F2 AP003733.4-201ENST00000623785 1697 ntBASIC22.55■■□□□ 1.2
PCDHB11Q9Y5F2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
PCDHB11Q9Y5F2 MIR638-201ENST00000385237 100 ntBASIC22.55■■□□□ 1.2
PCDHB11Q9Y5F2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB11Q9Y5F2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHB11Q9Y5F2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.55■■□□□ 1.2
PCDHB11Q9Y5F2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
PCDHB11Q9Y5F2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB11Q9Y5F2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
PCDHB11Q9Y5F2 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
PCDHB11Q9Y5F2 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB11Q9Y5F2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHB11Q9Y5F2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.54■■□□□ 1.2
PCDHB11Q9Y5F2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.54■■□□□ 1.2
PCDHB11Q9Y5F2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHB11Q9Y5F2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
PCDHB11Q9Y5F2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.54■■□□□ 1.2
PCDHB11Q9Y5F2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB11Q9Y5F2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22.53■■□□□ 1.2
PCDHB11Q9Y5F2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.53■■□□□ 1.2
PCDHB11Q9Y5F2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.53■■□□□ 1.2
PCDHB11Q9Y5F2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC22.53■■□□□ 1.2
PCDHB11Q9Y5F2 AC010997.5-201ENST00000609182 354 ntBASIC22.53■■□□□ 1.2
PCDHB11Q9Y5F2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB11Q9Y5F2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
PCDHB11Q9Y5F2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.53■■□□□ 1.2
PCDHB11Q9Y5F2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHB11Q9Y5F2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHB11Q9Y5F2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB11Q9Y5F2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB11Q9Y5F2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
PCDHB11Q9Y5F2 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
PCDHB11Q9Y5F2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHB11Q9Y5F2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDHB11Q9Y5F2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.52■■□□□ 1.2
PCDHB11Q9Y5F2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.52■■□□□ 1.2
PCDHB11Q9Y5F2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
PCDHB11Q9Y5F2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.52■■□□□ 1.2
PCDHB11Q9Y5F2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB11Q9Y5F2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.51■■□□□ 1.19
PCDHB11Q9Y5F2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB11Q9Y5F2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.51■■□□□ 1.19
PCDHB11Q9Y5F2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.51■■□□□ 1.19
PCDHB11Q9Y5F2 AL136116.3-201ENST00000402907 1138 ntBASIC22.51■■□□□ 1.19
PCDHB11Q9Y5F2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
PCDHB11Q9Y5F2 MTDHP2-201ENST00000601468 714 ntBASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms