Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 C9orf163-202ENST00000624034 2573 ntBASIC20.52■□□□□ 0.88
COPS3Q9UNS2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COPS3Q9UNS2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.52■□□□□ 0.88
COPS3Q9UNS2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COPS3Q9UNS2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COPS3Q9UNS2 CLDN5-201ENST00000403084 2357 ntBASIC20.52■□□□□ 0.88
COPS3Q9UNS2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COPS3Q9UNS2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
COPS3Q9UNS2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
COPS3Q9UNS2 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.52■□□□□ 0.87
COPS3Q9UNS2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.52■□□□□ 0.87
COPS3Q9UNS2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.52■□□□□ 0.87
COPS3Q9UNS2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COPS3Q9UNS2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.51■□□□□ 0.87
COPS3Q9UNS2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COPS3Q9UNS2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COPS3Q9UNS2 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COPS3Q9UNS2 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.51■□□□□ 0.87
COPS3Q9UNS2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.51■□□□□ 0.87
COPS3Q9UNS2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COPS3Q9UNS2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.51■□□□□ 0.87
COPS3Q9UNS2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COPS3Q9UNS2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COPS3Q9UNS2 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
COPS3Q9UNS2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.5■□□□□ 0.87
COPS3Q9UNS2 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COPS3Q9UNS2 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COPS3Q9UNS2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COPS3Q9UNS2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COPS3Q9UNS2 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COPS3Q9UNS2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
COPS3Q9UNS2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COPS3Q9UNS2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
COPS3Q9UNS2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
COPS3Q9UNS2 AC133552.2-201ENST00000619106 1032 ntBASIC20.49■□□□□ 0.87
COPS3Q9UNS2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.49■□□□□ 0.87
COPS3Q9UNS2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COPS3Q9UNS2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COPS3Q9UNS2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPS3Q9UNS2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
COPS3Q9UNS2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPS3Q9UNS2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPS3Q9UNS2 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COPS3Q9UNS2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COPS3Q9UNS2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPS3Q9UNS2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COPS3Q9UNS2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COPS3Q9UNS2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.47■□□□□ 0.87
COPS3Q9UNS2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COPS3Q9UNS2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COPS3Q9UNS2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.46■□□□□ 0.87
COPS3Q9UNS2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COPS3Q9UNS2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
COPS3Q9UNS2 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
COPS3Q9UNS2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
COPS3Q9UNS2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COPS3Q9UNS2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COPS3Q9UNS2 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
COPS3Q9UNS2 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.46■□□□□ 0.87
COPS3Q9UNS2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
COPS3Q9UNS2 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.46■□□□□ 0.87
COPS3Q9UNS2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COPS3Q9UNS2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.46■□□□□ 0.87
COPS3Q9UNS2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COPS3Q9UNS2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
COPS3Q9UNS2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COPS3Q9UNS2 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
COPS3Q9UNS2 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COPS3Q9UNS2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.45■□□□□ 0.86
COPS3Q9UNS2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
COPS3Q9UNS2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
COPS3Q9UNS2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COPS3Q9UNS2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COPS3Q9UNS2 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
COPS3Q9UNS2 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
COPS3Q9UNS2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
COPS3Q9UNS2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
COPS3Q9UNS2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COPS3Q9UNS2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
COPS3Q9UNS2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COPS3Q9UNS2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
COPS3Q9UNS2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
COPS3Q9UNS2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COPS3Q9UNS2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
COPS3Q9UNS2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COPS3Q9UNS2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.44■□□□□ 0.86
COPS3Q9UNS2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
COPS3Q9UNS2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPS3Q9UNS2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPS3Q9UNS2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.43■□□□□ 0.86
COPS3Q9UNS2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPS3Q9UNS2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPS3Q9UNS2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPS3Q9UNS2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
COPS3Q9UNS2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
COPS3Q9UNS2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
COPS3Q9UNS2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
COPS3Q9UNS2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
COPS3Q9UNS2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
COPS3Q9UNS2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms