Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
MKRN1Q9UHC7 AC097639.1-201ENST00000565519 1891 ntBASIC28.21■■■□□ 2.11
MKRN1Q9UHC7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
MKRN1Q9UHC7 AP001330.3-201ENST00000520123 633 ntBASIC28.21■■■□□ 2.11
MKRN1Q9UHC7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC28.21■■■□□ 2.11
MKRN1Q9UHC7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC28.21■■■□□ 2.11
MKRN1Q9UHC7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
MKRN1Q9UHC7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
MKRN1Q9UHC7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC28.2■■■□□ 2.1
MKRN1Q9UHC7 FOXO3B-201ENST00000395675 1928 ntBASIC28.2■■■□□ 2.1
MKRN1Q9UHC7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
MKRN1Q9UHC7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC28.19■■■□□ 2.1
MKRN1Q9UHC7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
MKRN1Q9UHC7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
MKRN1Q9UHC7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
MKRN1Q9UHC7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC28.18■■■□□ 2.1
MKRN1Q9UHC7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
MKRN1Q9UHC7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
MKRN1Q9UHC7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.18■■■□□ 2.1
MKRN1Q9UHC7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC28.18■■■□□ 2.1
MKRN1Q9UHC7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC28.18■■■□□ 2.1
MKRN1Q9UHC7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC28.18■■■□□ 2.1
MKRN1Q9UHC7 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
MKRN1Q9UHC7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
MKRN1Q9UHC7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
MKRN1Q9UHC7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC28.17■■■□□ 2.1
MKRN1Q9UHC7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC28.17■■■□□ 2.1
MKRN1Q9UHC7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.17■■■□□ 2.1
MKRN1Q9UHC7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
MKRN1Q9UHC7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
MKRN1Q9UHC7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
MKRN1Q9UHC7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
MKRN1Q9UHC7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
MKRN1Q9UHC7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC28.16■■■□□ 2.1
MKRN1Q9UHC7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC28.16■■■□□ 2.1
MKRN1Q9UHC7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC28.16■■■□□ 2.1
MKRN1Q9UHC7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.16■■■□□ 2.1
MKRN1Q9UHC7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC28.15■■■□□ 2.1
MKRN1Q9UHC7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
MKRN1Q9UHC7 SRD5A1P1-201ENST00000442297 786 ntBASIC28.15■■■□□ 2.1
MKRN1Q9UHC7 AC091305.1-201ENST00000479476 895 ntBASIC28.15■■■□□ 2.1
MKRN1Q9UHC7 AC011551.1-201ENST00000614101 683 ntBASIC28.15■■■□□ 2.1
MKRN1Q9UHC7 GAK-223ENST00000628912 497 ntTSL 5 BASIC28.15■■■□□ 2.1
MKRN1Q9UHC7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.14■■■□□ 2.1
MKRN1Q9UHC7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
MKRN1Q9UHC7 ID1-201ENST00000376105 1233 ntBASIC28.14■■■□□ 2.1
MKRN1Q9UHC7 AL137784.2-201ENST00000607332 1000 ntBASIC28.14■■■□□ 2.1
MKRN1Q9UHC7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
MKRN1Q9UHC7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
MKRN1Q9UHC7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.13■■■□□ 2.09
MKRN1Q9UHC7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
MKRN1Q9UHC7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
MKRN1Q9UHC7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.13■■■□□ 2.09
MKRN1Q9UHC7 AC022517.1-201ENST00000592429 346 ntBASIC28.13■■■□□ 2.09
MKRN1Q9UHC7 DUSP8P4-201ENST00000399538 1761 ntBASIC28.13■■■□□ 2.09
MKRN1Q9UHC7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC28.13■■■□□ 2.09
MKRN1Q9UHC7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.13■■■□□ 2.09
MKRN1Q9UHC7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
MKRN1Q9UHC7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
MKRN1Q9UHC7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
MKRN1Q9UHC7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
MKRN1Q9UHC7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
MKRN1Q9UHC7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
MKRN1Q9UHC7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
MKRN1Q9UHC7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
MKRN1Q9UHC7 AC091060.1-201ENST00000623524 1766 ntBASIC28.11■■■□□ 2.09
MKRN1Q9UHC7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
MKRN1Q9UHC7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
MKRN1Q9UHC7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
MKRN1Q9UHC7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
MKRN1Q9UHC7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC28.1■■■□□ 2.09
MKRN1Q9UHC7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC28.1■■■□□ 2.09
MKRN1Q9UHC7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC28.1■■■□□ 2.09
MKRN1Q9UHC7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC28.1■■■□□ 2.09
MKRN1Q9UHC7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
MKRN1Q9UHC7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC28.1■■■□□ 2.09
MKRN1Q9UHC7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
MKRN1Q9UHC7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
MKRN1Q9UHC7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
MKRN1Q9UHC7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
MKRN1Q9UHC7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
MKRN1Q9UHC7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
MKRN1Q9UHC7 ESRRAP2-201ENST00000418437 1549 ntBASIC28.08■■■□□ 2.09
MKRN1Q9UHC7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
MKRN1Q9UHC7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
MKRN1Q9UHC7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC28.08■■■□□ 2.09
MKRN1Q9UHC7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
MKRN1Q9UHC7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC28.08■■■□□ 2.09
MKRN1Q9UHC7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC28.08■■■□□ 2.09
MKRN1Q9UHC7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
MKRN1Q9UHC7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
MKRN1Q9UHC7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
MKRN1Q9UHC7 MAG-206ENST00000597035 542 ntTSL 4 BASIC28.07■■■□□ 2.08
MKRN1Q9UHC7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.07■■■□□ 2.08
MKRN1Q9UHC7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
MKRN1Q9UHC7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
MKRN1Q9UHC7 CA15P2-201ENST00000611168 834 ntBASIC28.06■■■□□ 2.08
MKRN1Q9UHC7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
MKRN1Q9UHC7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
MKRN1Q9UHC7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms