Protein–RNA interactions for Protein: Q9UBB5

MBD2, Methyl-CpG-binding domain protein 2, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD2Q9UBB5 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.27■□□□□ 0.68
MBD2Q9UBB5 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
MBD2Q9UBB5 AL121603.2-201ENST00000557373 2117 ntBASIC19.27■□□□□ 0.67
MBD2Q9UBB5 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.27■□□□□ 0.67
MBD2Q9UBB5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD2Q9UBB5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD2Q9UBB5 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
MBD2Q9UBB5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD2Q9UBB5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MBD2Q9UBB5 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MBD2Q9UBB5 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD2Q9UBB5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD2Q9UBB5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD2Q9UBB5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD2Q9UBB5 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MBD2Q9UBB5 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.25■□□□□ 0.67
MBD2Q9UBB5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD2Q9UBB5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
MBD2Q9UBB5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
MBD2Q9UBB5 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD2Q9UBB5 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.25■□□□□ 0.67
MBD2Q9UBB5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.25■□□□□ 0.67
MBD2Q9UBB5 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.25■□□□□ 0.67
MBD2Q9UBB5 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD2Q9UBB5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD2Q9UBB5 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.24■□□□□ 0.67
MBD2Q9UBB5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC19.24■□□□□ 0.67
MBD2Q9UBB5 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.24■□□□□ 0.67
MBD2Q9UBB5 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD2Q9UBB5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD2Q9UBB5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD2Q9UBB5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD2Q9UBB5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD2Q9UBB5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD2Q9UBB5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.24■□□□□ 0.67
MBD2Q9UBB5 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD2Q9UBB5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MBD2Q9UBB5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.23■□□□□ 0.67
MBD2Q9UBB5 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD2Q9UBB5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD2Q9UBB5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD2Q9UBB5 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD2Q9UBB5 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
MBD2Q9UBB5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.23■□□□□ 0.67
MBD2Q9UBB5 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD2Q9UBB5 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD2Q9UBB5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.23■□□□□ 0.67
MBD2Q9UBB5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
MBD2Q9UBB5 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD2Q9UBB5 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.22■□□□□ 0.67
MBD2Q9UBB5 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD2Q9UBB5 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD2Q9UBB5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.22■□□□□ 0.67
MBD2Q9UBB5 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD2Q9UBB5 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD2Q9UBB5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.21■□□□□ 0.67
MBD2Q9UBB5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD2Q9UBB5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MBD2Q9UBB5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
MBD2Q9UBB5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MBD2Q9UBB5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MBD2Q9UBB5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD2Q9UBB5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
MBD2Q9UBB5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MBD2Q9UBB5 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MBD2Q9UBB5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD2Q9UBB5 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MBD2Q9UBB5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD2Q9UBB5 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD2Q9UBB5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
MBD2Q9UBB5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
MBD2Q9UBB5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD2Q9UBB5 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MBD2Q9UBB5 AC005559.1-201ENST00000589661 871 ntBASIC19.2■□□□□ 0.66
MBD2Q9UBB5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.2■□□□□ 0.66
MBD2Q9UBB5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD2Q9UBB5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD2Q9UBB5 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD2Q9UBB5 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD2Q9UBB5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.2■□□□□ 0.66
MBD2Q9UBB5 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD2Q9UBB5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MBD2Q9UBB5 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.19■□□□□ 0.66
MBD2Q9UBB5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MBD2Q9UBB5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD2Q9UBB5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD2Q9UBB5 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.19■□□□□ 0.66
MBD2Q9UBB5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
MBD2Q9UBB5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD2Q9UBB5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.19■□□□□ 0.66
MBD2Q9UBB5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
MBD2Q9UBB5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
MBD2Q9UBB5 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MBD2Q9UBB5 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD2Q9UBB5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
MBD2Q9UBB5 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD2Q9UBB5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.18■□□□□ 0.66
MBD2Q9UBB5 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD2Q9UBB5 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MBD2Q9UBB5 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms