Protein–RNA interactions for Protein: Q9HC98

NEK6, Serine/threonine-protein kinase Nek6, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6Q9HC98 MIR7108-201ENST00000614319 87 ntBASIC20.54■□□□□ 0.88
NEK6Q9HC98 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEK6Q9HC98 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NEK6Q9HC98 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NEK6Q9HC98 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.54■□□□□ 0.88
NEK6Q9HC98 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
NEK6Q9HC98 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NEK6Q9HC98 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.53■□□□□ 0.88
NEK6Q9HC98 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NEK6Q9HC98 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
NEK6Q9HC98 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.53■□□□□ 0.88
NEK6Q9HC98 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.53■□□□□ 0.88
NEK6Q9HC98 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NEK6Q9HC98 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NEK6Q9HC98 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.53■□□□□ 0.88
NEK6Q9HC98 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NEK6Q9HC98 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.52■□□□□ 0.88
NEK6Q9HC98 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NEK6Q9HC98 AL121603.2-201ENST00000557373 2117 ntBASIC20.52■□□□□ 0.88
NEK6Q9HC98 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEK6Q9HC98 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEK6Q9HC98 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEK6Q9HC98 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
NEK6Q9HC98 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEK6Q9HC98 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NEK6Q9HC98 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.51■□□□□ 0.87
NEK6Q9HC98 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEK6Q9HC98 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NEK6Q9HC98 AP003733.4-201ENST00000623785 1697 ntBASIC20.51■□□□□ 0.87
NEK6Q9HC98 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.51■□□□□ 0.87
NEK6Q9HC98 ABCB10P4-201ENST00000566803 2184 ntBASIC20.51■□□□□ 0.87
NEK6Q9HC98 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NEK6Q9HC98 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEK6Q9HC98 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
NEK6Q9HC98 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.5■□□□□ 0.87
NEK6Q9HC98 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEK6Q9HC98 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NEK6Q9HC98 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEK6Q9HC98 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEK6Q9HC98 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEK6Q9HC98 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEK6Q9HC98 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.49■□□□□ 0.87
NEK6Q9HC98 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.49■□□□□ 0.87
NEK6Q9HC98 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NEK6Q9HC98 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.49■□□□□ 0.87
NEK6Q9HC98 SMPD5-203ENST00000639008 1464 ntBASIC20.49■□□□□ 0.87
NEK6Q9HC98 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NEK6Q9HC98 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NEK6Q9HC98 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
NEK6Q9HC98 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.48■□□□□ 0.87
NEK6Q9HC98 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.48■□□□□ 0.87
NEK6Q9HC98 AC025884.2-201ENST00000553429 711 ntBASIC20.48■□□□□ 0.87
NEK6Q9HC98 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NEK6Q9HC98 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NEK6Q9HC98 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NEK6Q9HC98 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEK6Q9HC98 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.47■□□□□ 0.87
NEK6Q9HC98 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NEK6Q9HC98 AC060814.1-201ENST00000554326 538 ntBASIC20.47■□□□□ 0.87
NEK6Q9HC98 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.47■□□□□ 0.87
NEK6Q9HC98 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
NEK6Q9HC98 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NEK6Q9HC98 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NEK6Q9HC98 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.47■□□□□ 0.87
NEK6Q9HC98 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.46■□□□□ 0.87
NEK6Q9HC98 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEK6Q9HC98 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEK6Q9HC98 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEK6Q9HC98 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NEK6Q9HC98 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEK6Q9HC98 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEK6Q9HC98 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEK6Q9HC98 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEK6Q9HC98 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEK6Q9HC98 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEK6Q9HC98 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.46■□□□□ 0.87
NEK6Q9HC98 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
NEK6Q9HC98 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NEK6Q9HC98 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NEK6Q9HC98 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.45■□□□□ 0.86
NEK6Q9HC98 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms