Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.37■■□□□ 1.01
UBQLN3Q9H347 LINC00543-201ENST00000567234 1845 ntBASIC21.37■■□□□ 1.01
UBQLN3Q9H347 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN3Q9H347 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN3Q9H347 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN3Q9H347 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.37■■□□□ 1.01
UBQLN3Q9H347 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN3Q9H347 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN3Q9H347 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN3Q9H347 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN3Q9H347 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN3Q9H347 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN3Q9H347 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN3Q9H347 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN3Q9H347 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
UBQLN3Q9H347 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.36■■□□□ 1.01
UBQLN3Q9H347 MIR4281-201ENST00000580852 62 ntBASIC21.36■■□□□ 1.01
UBQLN3Q9H347 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.36■■□□□ 1.01
UBQLN3Q9H347 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN3Q9H347 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN3Q9H347 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.36■■□□□ 1.01
UBQLN3Q9H347 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN3Q9H347 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN3Q9H347 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN3Q9H347 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
UBQLN3Q9H347 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.35■■□□□ 1.01
UBQLN3Q9H347 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN3Q9H347 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
UBQLN3Q9H347 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN3Q9H347 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN3Q9H347 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN3Q9H347 GUSBP5-201ENST00000418136 578 ntBASIC21.35■■□□□ 1.01
UBQLN3Q9H347 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.35■■□□□ 1.01
UBQLN3Q9H347 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN3Q9H347 AC137630.3-201ENST00000607245 391 ntBASIC21.35■■□□□ 1.01
UBQLN3Q9H347 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.35■■□□□ 1.01
UBQLN3Q9H347 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN3Q9H347 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN3Q9H347 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBQLN3Q9H347 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UBQLN3Q9H347 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBQLN3Q9H347 AC239859.2-201ENST00000444165 318 ntBASIC21.34■■□□□ 1.01
UBQLN3Q9H347 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UBQLN3Q9H347 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
UBQLN3Q9H347 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.34■■□□□ 1.01
UBQLN3Q9H347 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBQLN3Q9H347 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.34■■□□□ 1.01
UBQLN3Q9H347 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
UBQLN3Q9H347 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBQLN3Q9H347 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
UBQLN3Q9H347 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.33■■□□□ 1.01
UBQLN3Q9H347 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.33■■□□□ 1.01
UBQLN3Q9H347 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.33■■□□□ 1.01
UBQLN3Q9H347 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
UBQLN3Q9H347 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.33■■□□□ 1
UBQLN3Q9H347 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.32■■□□□ 1
UBQLN3Q9H347 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBQLN3Q9H347 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBQLN3Q9H347 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.32■■□□□ 1
UBQLN3Q9H347 BX664725.1-201ENST00000438252 379 ntBASIC21.32■■□□□ 1
UBQLN3Q9H347 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.32■■□□□ 1
UBQLN3Q9H347 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
UBQLN3Q9H347 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.32■■□□□ 1
UBQLN3Q9H347 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBQLN3Q9H347 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBQLN3Q9H347 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
UBQLN3Q9H347 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.31■■□□□ 1
UBQLN3Q9H347 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBQLN3Q9H347 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBQLN3Q9H347 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.31■■□□□ 1
UBQLN3Q9H347 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBQLN3Q9H347 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.31■■□□□ 1
UBQLN3Q9H347 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
UBQLN3Q9H347 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
UBQLN3Q9H347 AC141586.4-201ENST00000624558 1573 ntBASIC21.31■■□□□ 1
UBQLN3Q9H347 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.3■■□□□ 1
UBQLN3Q9H347 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBQLN3Q9H347 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.3■■□□□ 1
UBQLN3Q9H347 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.3■■□□□ 1
UBQLN3Q9H347 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBQLN3Q9H347 AC090877.2-201ENST00000558441 1738 ntBASIC21.29■■□□□ 1
UBQLN3Q9H347 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
UBQLN3Q9H347 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
UBQLN3Q9H347 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.29■■□□□ 1
UBQLN3Q9H347 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.29■■□□□ 1
UBQLN3Q9H347 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBQLN3Q9H347 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBQLN3Q9H347 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
UBQLN3Q9H347 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
UBQLN3Q9H347 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
UBQLN3Q9H347 AC021242.3-201ENST00000607598 1377 ntBASIC21.28■■□□□ 1
UBQLN3Q9H347 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.28■■□□□ 1
UBQLN3Q9H347 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.28■■□□□ 1
UBQLN3Q9H347 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
UBQLN3Q9H347 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
UBQLN3Q9H347 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UBQLN3Q9H347 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
UBQLN3Q9H347 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
UBQLN3Q9H347 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.27■■□□□ 1
UBQLN3Q9H347 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms