Protein–RNA interactions for Protein: Q96QR1

SCGB3A1, Secretoglobin family 3A member 1, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A1Q96QR1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCGB3A1Q96QR1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCGB3A1Q96QR1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SCGB3A1Q96QR1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC16.46■□□□□ 0.23
SCGB3A1Q96QR1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCGB3A1Q96QR1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SCGB3A1Q96QR1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCGB3A1Q96QR1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
SCGB3A1Q96QR1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
SCGB3A1Q96QR1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SCGB3A1Q96QR1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCGB3A1Q96QR1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCGB3A1Q96QR1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.45■□□□□ 0.22
SCGB3A1Q96QR1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SCGB3A1Q96QR1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
SCGB3A1Q96QR1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCGB3A1Q96QR1 MIR3665-201ENST00000578708 105 ntBASIC16.45■□□□□ 0.22
SCGB3A1Q96QR1 AL359258.2-201ENST00000564063 1566 ntBASIC16.45■□□□□ 0.22
SCGB3A1Q96QR1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCGB3A1Q96QR1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCGB3A1Q96QR1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCGB3A1Q96QR1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCGB3A1Q96QR1 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SCGB3A1Q96QR1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SCGB3A1Q96QR1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCGB3A1Q96QR1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCGB3A1Q96QR1 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCGB3A1Q96QR1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SCGB3A1Q96QR1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCGB3A1Q96QR1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.44■□□□□ 0.22
SCGB3A1Q96QR1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SCGB3A1Q96QR1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.44■□□□□ 0.22
SCGB3A1Q96QR1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
SCGB3A1Q96QR1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC16.44■□□□□ 0.22
SCGB3A1Q96QR1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCGB3A1Q96QR1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC16.44■□□□□ 0.22
SCGB3A1Q96QR1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCGB3A1Q96QR1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SCGB3A1Q96QR1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 MIR6089-201ENST00000616698 64 ntBASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SCGB3A1Q96QR1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCGB3A1Q96QR1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.42■□□□□ 0.22
SCGB3A1Q96QR1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCGB3A1Q96QR1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCGB3A1Q96QR1 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.42■□□□□ 0.22
SCGB3A1Q96QR1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCGB3A1Q96QR1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
SCGB3A1Q96QR1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SCGB3A1Q96QR1 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SCGB3A1Q96QR1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SCGB3A1Q96QR1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCGB3A1Q96QR1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCGB3A1Q96QR1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCGB3A1Q96QR1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCGB3A1Q96QR1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
SCGB3A1Q96QR1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCGB3A1Q96QR1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.41■□□□□ 0.22
SCGB3A1Q96QR1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCGB3A1Q96QR1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCGB3A1Q96QR1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SCGB3A1Q96QR1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SCGB3A1Q96QR1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.41■□□□□ 0.22
SCGB3A1Q96QR1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCGB3A1Q96QR1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
SCGB3A1Q96QR1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SCGB3A1Q96QR1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SCGB3A1Q96QR1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCGB3A1Q96QR1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.4■□□□□ 0.22
SCGB3A1Q96QR1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.4■□□□□ 0.22
SCGB3A1Q96QR1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCGB3A1Q96QR1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCGB3A1Q96QR1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCGB3A1Q96QR1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC16.4■□□□□ 0.22
SCGB3A1Q96QR1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCGB3A1Q96QR1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCGB3A1Q96QR1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SCGB3A1Q96QR1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SCGB3A1Q96QR1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SCGB3A1Q96QR1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
SCGB3A1Q96QR1 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCGB3A1Q96QR1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SCGB3A1Q96QR1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms