Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
FOXN4Q96NZ1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN4Q96NZ1 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
FOXN4Q96NZ1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXN4Q96NZ1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN4Q96NZ1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.62■□□□□ 0.89
FOXN4Q96NZ1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN4Q96NZ1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN4Q96NZ1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
FOXN4Q96NZ1 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN4Q96NZ1 AC141586.4-201ENST00000624558 1573 ntBASIC20.61■□□□□ 0.89
FOXN4Q96NZ1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN4Q96NZ1 AC139795.1-202ENST00000500444 432 ntBASIC20.61■□□□□ 0.89
FOXN4Q96NZ1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXN4Q96NZ1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN4Q96NZ1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
FOXN4Q96NZ1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN4Q96NZ1 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
FOXN4Q96NZ1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXN4Q96NZ1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXN4Q96NZ1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
FOXN4Q96NZ1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
FOXN4Q96NZ1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXN4Q96NZ1 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXN4Q96NZ1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.6■□□□□ 0.89
FOXN4Q96NZ1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
FOXN4Q96NZ1 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXN4Q96NZ1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.59■□□□□ 0.89
FOXN4Q96NZ1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.59■□□□□ 0.89
FOXN4Q96NZ1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.59■□□□□ 0.89
FOXN4Q96NZ1 AC074183.2-201ENST00000623112 922 ntBASIC20.59■□□□□ 0.89
FOXN4Q96NZ1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
FOXN4Q96NZ1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
FOXN4Q96NZ1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
FOXN4Q96NZ1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXN4Q96NZ1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.89
FOXN4Q96NZ1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXN4Q96NZ1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
FOXN4Q96NZ1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
FOXN4Q96NZ1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.58■□□□□ 0.89
FOXN4Q96NZ1 LONRF2P2-201ENST00000439212 571 ntBASIC20.58■□□□□ 0.89
FOXN4Q96NZ1 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.58■□□□□ 0.89
FOXN4Q96NZ1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.58■□□□□ 0.89
FOXN4Q96NZ1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
FOXN4Q96NZ1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXN4Q96NZ1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
FOXN4Q96NZ1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.58■□□□□ 0.88
FOXN4Q96NZ1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.58■□□□□ 0.88
FOXN4Q96NZ1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXN4Q96NZ1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.57■□□□□ 0.88
FOXN4Q96NZ1 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN4Q96NZ1 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN4Q96NZ1 AL592295.1-201ENST00000400984 884 ntBASIC20.57■□□□□ 0.88
FOXN4Q96NZ1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXN4Q96NZ1 KRT8P33-201ENST00000508125 1423 ntBASIC20.57■□□□□ 0.88
FOXN4Q96NZ1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.57■□□□□ 0.88
FOXN4Q96NZ1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN4Q96NZ1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN4Q96NZ1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.57■□□□□ 0.88
FOXN4Q96NZ1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
FOXN4Q96NZ1 AC090877.2-201ENST00000558441 1738 ntBASIC20.56■□□□□ 0.88
FOXN4Q96NZ1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN4Q96NZ1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN4Q96NZ1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN4Q96NZ1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN4Q96NZ1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.56■□□□□ 0.88
FOXN4Q96NZ1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN4Q96NZ1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN4Q96NZ1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN4Q96NZ1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.56■□□□□ 0.88
FOXN4Q96NZ1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN4Q96NZ1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
FOXN4Q96NZ1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
FOXN4Q96NZ1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN4Q96NZ1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN4Q96NZ1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.55■□□□□ 0.88
FOXN4Q96NZ1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXN4Q96NZ1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.55■□□□□ 0.88
FOXN4Q96NZ1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN4Q96NZ1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN4Q96NZ1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FOXN4Q96NZ1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
FOXN4Q96NZ1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN4Q96NZ1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.54■□□□□ 0.88
FOXN4Q96NZ1 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN4Q96NZ1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
FOXN4Q96NZ1 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN4Q96NZ1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN4Q96NZ1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.54■□□□□ 0.88
FOXN4Q96NZ1 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN4Q96NZ1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
FOXN4Q96NZ1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FOXN4Q96NZ1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN4Q96NZ1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN4Q96NZ1 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN4Q96NZ1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN4Q96NZ1 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FOXN4Q96NZ1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.53■□□□□ 0.88
FOXN4Q96NZ1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.53■□□□□ 0.88
FOXN4Q96NZ1 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms