Protein–RNA interactions for Protein: Q96K19

RNF170, E3 ubiquitin-protein ligase RNF170, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170Q96K19 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF170Q96K19 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF170Q96K19 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RNF170Q96K19 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF170Q96K19 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF170Q96K19 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.37■□□□□ 0.85
RNF170Q96K19 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF170Q96K19 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF170Q96K19 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.37■□□□□ 0.85
RNF170Q96K19 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF170Q96K19 HSD17B1P1-201ENST00000590052 955 ntBASIC20.37■□□□□ 0.85
RNF170Q96K19 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
RNF170Q96K19 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF170Q96K19 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF170Q96K19 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RNF170Q96K19 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF170Q96K19 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF170Q96K19 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF170Q96K19 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF170Q96K19 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.36■□□□□ 0.85
RNF170Q96K19 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.36■□□□□ 0.85
RNF170Q96K19 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.36■□□□□ 0.85
RNF170Q96K19 EP400NL-214ENST00000641289 2402 ntBASIC20.36■□□□□ 0.85
RNF170Q96K19 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF170Q96K19 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF170Q96K19 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF170Q96K19 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF170Q96K19 C1orf229-201ENST00000623686 2258 ntBASIC20.36■□□□□ 0.85
RNF170Q96K19 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF170Q96K19 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF170Q96K19 AC009831.1-201ENST00000580420 1582 ntBASIC20.35■□□□□ 0.85
RNF170Q96K19 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF170Q96K19 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RNF170Q96K19 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF170Q96K19 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF170Q96K19 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF170Q96K19 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.34■□□□□ 0.85
RNF170Q96K19 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF170Q96K19 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
RNF170Q96K19 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF170Q96K19 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF170Q96K19 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF170Q96K19 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF170Q96K19 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF170Q96K19 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF170Q96K19 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF170Q96K19 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RNF170Q96K19 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RNF170Q96K19 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF170Q96K19 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RNF170Q96K19 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF170Q96K19 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF170Q96K19 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RNF170Q96K19 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF170Q96K19 RARRES2P2-201ENST00000394842 485 ntBASIC20.33■□□□□ 0.85
RNF170Q96K19 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF170Q96K19 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.33■□□□□ 0.84
RNF170Q96K19 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF170Q96K19 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF170Q96K19 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF170Q96K19 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF170Q96K19 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF170Q96K19 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF170Q96K19 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF170Q96K19 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF170Q96K19 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF170Q96K19 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF170Q96K19 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF170Q96K19 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RNF170Q96K19 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF170Q96K19 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
RNF170Q96K19 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RNF170Q96K19 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
RNF170Q96K19 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF170Q96K19 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF170Q96K19 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF170Q96K19 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF170Q96K19 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF170Q96K19 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RNF170Q96K19 AP003733.4-201ENST00000623785 1697 ntBASIC20.31■□□□□ 0.84
RNF170Q96K19 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF170Q96K19 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF170Q96K19 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.3■□□□□ 0.84
RNF170Q96K19 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF170Q96K19 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF170Q96K19 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF170Q96K19 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF170Q96K19 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF170Q96K19 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RNF170Q96K19 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF170Q96K19 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF170Q96K19 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF170Q96K19 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF170Q96K19 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF170Q96K19 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF170Q96K19 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF170Q96K19 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RNF170Q96K19 KRT18P10-201ENST00000388836 1287 ntBASIC20.29■□□□□ 0.84
RNF170Q96K19 SLC6A10P-202ENST00000431994 2058 ntBASIC20.29■□□□□ 0.84
RNF170Q96K19 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms