Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
LRRC58Q96CX6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
LRRC58Q96CX6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
LRRC58Q96CX6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRC58Q96CX6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.96■■□□□ 1.11
LRRC58Q96CX6 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRC58Q96CX6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
LRRC58Q96CX6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.96■■□□□ 1.11
LRRC58Q96CX6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.96■■□□□ 1.11
LRRC58Q96CX6 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
LRRC58Q96CX6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC58Q96CX6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC58Q96CX6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC58Q96CX6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC58Q96CX6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC58Q96CX6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.95■■□□□ 1.1
LRRC58Q96CX6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC58Q96CX6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC58Q96CX6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC58Q96CX6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRC58Q96CX6 AL117328.2-201ENST00000624617 1940 ntBASIC21.94■■□□□ 1.1
LRRC58Q96CX6 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC58Q96CX6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC58Q96CX6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC21.94■■□□□ 1.1
LRRC58Q96CX6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC58Q96CX6 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC58Q96CX6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC58Q96CX6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC58Q96CX6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC58Q96CX6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC58Q96CX6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.94■■□□□ 1.1
LRRC58Q96CX6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRC58Q96CX6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRRC58Q96CX6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LRRC58Q96CX6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
LRRC58Q96CX6 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
LRRC58Q96CX6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.93■■□□□ 1.1
LRRC58Q96CX6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.93■■□□□ 1.1
LRRC58Q96CX6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.93■■□□□ 1.1
LRRC58Q96CX6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.93■■□□□ 1.1
LRRC58Q96CX6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
LRRC58Q96CX6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC58Q96CX6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC58Q96CX6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC58Q96CX6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC58Q96CX6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.92■■□□□ 1.1
LRRC58Q96CX6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.92■■□□□ 1.1
LRRC58Q96CX6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC58Q96CX6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC58Q96CX6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC58Q96CX6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LRRC58Q96CX6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.92■■□□□ 1.1
LRRC58Q96CX6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.91■■□□□ 1.1
LRRC58Q96CX6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
LRRC58Q96CX6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC58Q96CX6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC58Q96CX6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
LRRC58Q96CX6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC58Q96CX6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC58Q96CX6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.91■■□□□ 1.1
LRRC58Q96CX6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC58Q96CX6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC58Q96CX6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC58Q96CX6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC58Q96CX6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC58Q96CX6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
LRRC58Q96CX6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
LRRC58Q96CX6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
LRRC58Q96CX6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC58Q96CX6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.9■■□□□ 1.1
LRRC58Q96CX6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.9■■□□□ 1.1
LRRC58Q96CX6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
LRRC58Q96CX6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC58Q96CX6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.9■■□□□ 1.1
LRRC58Q96CX6 AC007029.1-201ENST00000604183 313 ntBASIC21.9■■□□□ 1.1
LRRC58Q96CX6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC58Q96CX6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.9■■□□□ 1.1
LRRC58Q96CX6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.9■■□□□ 1.1
LRRC58Q96CX6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.9■■□□□ 1.1
LRRC58Q96CX6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC58Q96CX6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LRRC58Q96CX6 ANOS2P-203ENST00000472227 1816 ntBASIC21.9■■□□□ 1.1
LRRC58Q96CX6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRRC58Q96CX6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRRC58Q96CX6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
LRRC58Q96CX6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
LRRC58Q96CX6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
LRRC58Q96CX6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.89■■□□□ 1.09
LRRC58Q96CX6 RAP2CP1-202ENST00000605179 643 ntBASIC21.89■■□□□ 1.09
LRRC58Q96CX6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LRRC58Q96CX6 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LRRC58Q96CX6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
LRRC58Q96CX6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
LRRC58Q96CX6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
LRRC58Q96CX6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC21.88■■□□□ 1.09
LRRC58Q96CX6 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.88■■□□□ 1.09
LRRC58Q96CX6 AC022413.1-201ENST00000624602 984 ntBASIC21.88■■□□□ 1.09
LRRC58Q96CX6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
LRRC58Q96CX6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
LRRC58Q96CX6 AC233723.2-201ENST00000623798 2106 ntBASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms