Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.11■■□□□ 1.45
TTC28Q96AY4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
TTC28Q96AY4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.1■■□□□ 1.45
TTC28Q96AY4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TTC28Q96AY4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC24.1■■□□□ 1.45
TTC28Q96AY4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TTC28Q96AY4 AC005703.6-201ENST00000623265 1329 ntBASIC24.1■■□□□ 1.45
TTC28Q96AY4 NCF1B-203ENST00000435988 1254 ntBASIC24.1■■□□□ 1.45
TTC28Q96AY4 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.1■■□□□ 1.45
TTC28Q96AY4 AC092171.4-201ENST00000609130 632 ntBASIC24.1■■□□□ 1.45
TTC28Q96AY4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.1■■□□□ 1.45
TTC28Q96AY4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.09■■□□□ 1.45
TTC28Q96AY4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
TTC28Q96AY4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
TTC28Q96AY4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
TTC28Q96AY4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.09■■□□□ 1.45
TTC28Q96AY4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC24.09■■□□□ 1.45
TTC28Q96AY4 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.09■■□□□ 1.45
TTC28Q96AY4 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.09■■□□□ 1.45
TTC28Q96AY4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
TTC28Q96AY4 BX255925.1-201ENST00000566954 1854 ntBASIC24.08■■□□□ 1.45
TTC28Q96AY4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.08■■□□□ 1.45
TTC28Q96AY4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
TTC28Q96AY4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TTC28Q96AY4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
TTC28Q96AY4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
TTC28Q96AY4 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.08■■□□□ 1.44
TTC28Q96AY4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.08■■□□□ 1.44
TTC28Q96AY4 MIR4651-201ENST00000582622 73 ntBASIC24.07■■□□□ 1.44
TTC28Q96AY4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TTC28Q96AY4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
TTC28Q96AY4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC24.07■■□□□ 1.44
TTC28Q96AY4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TTC28Q96AY4 KRT18P14-201ENST00000534205 1250 ntBASIC24.06■■□□□ 1.44
TTC28Q96AY4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TTC28Q96AY4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.06■■□□□ 1.44
TTC28Q96AY4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC24.06■■□□□ 1.44
TTC28Q96AY4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TTC28Q96AY4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TTC28Q96AY4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.05■■□□□ 1.44
TTC28Q96AY4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TTC28Q96AY4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.05■■□□□ 1.44
TTC28Q96AY4 AL109923.1-201ENST00000618799 583 ntBASIC24.05■■□□□ 1.44
TTC28Q96AY4 AC241377.3-202ENST00000626088 1088 ntBASIC24.05■■□□□ 1.44
TTC28Q96AY4 AC241585.3-202ENST00000628937 1088 ntBASIC24.05■■□□□ 1.44
TTC28Q96AY4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TTC28Q96AY4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TTC28Q96AY4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TTC28Q96AY4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TTC28Q96AY4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TTC28Q96AY4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.05■■□□□ 1.44
TTC28Q96AY4 AC099791.2-201ENST00000605725 427 ntBASIC24.05■■□□□ 1.44
TTC28Q96AY4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
TTC28Q96AY4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
TTC28Q96AY4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
TTC28Q96AY4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TTC28Q96AY4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TTC28Q96AY4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC24.04■■□□□ 1.44
TTC28Q96AY4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TTC28Q96AY4 AC073111.5-205ENST00000641717 521 ntBASIC24.04■■□□□ 1.44
TTC28Q96AY4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.03■■□□□ 1.44
TTC28Q96AY4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.03■■□□□ 1.44
TTC28Q96AY4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TTC28Q96AY4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TTC28Q96AY4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TTC28Q96AY4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
TTC28Q96AY4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.02■■□□□ 1.44
TTC28Q96AY4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.02■■□□□ 1.44
TTC28Q96AY4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TTC28Q96AY4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TTC28Q96AY4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TTC28Q96AY4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.02■■□□□ 1.44
TTC28Q96AY4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.02■■□□□ 1.44
TTC28Q96AY4 AC006970.2-201ENST00000450065 779 ntBASIC24.01■■□□□ 1.43
TTC28Q96AY4 KRT18P61-201ENST00000585825 1298 ntBASIC24.01■■□□□ 1.43
TTC28Q96AY4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.01■■□□□ 1.43
TTC28Q96AY4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.01■■□□□ 1.43
TTC28Q96AY4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TTC28Q96AY4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TTC28Q96AY4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.01■■□□□ 1.43
TTC28Q96AY4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TTC28Q96AY4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24■■□□□ 1.43
TTC28Q96AY4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24■■□□□ 1.43
TTC28Q96AY4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24■■□□□ 1.43
TTC28Q96AY4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TTC28Q96AY4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TTC28Q96AY4 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24■■□□□ 1.43
TTC28Q96AY4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24■■□□□ 1.43
TTC28Q96AY4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
TTC28Q96AY4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TTC28Q96AY4 NT5C3AP1-201ENST00000394500 1012 ntBASIC23.99■■□□□ 1.43
TTC28Q96AY4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TTC28Q96AY4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.99■■□□□ 1.43
TTC28Q96AY4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
TTC28Q96AY4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.99■■□□□ 1.43
TTC28Q96AY4 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.99■■□□□ 1.43
TTC28Q96AY4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.98■■□□□ 1.43
TTC28Q96AY4 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC28Q96AY4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.98■■□□□ 1.43
TTC28Q96AY4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms