Protein–RNA interactions for Protein: Q92743

HTRA1, Serine protease HTRA1, humanhuman

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1Q92743 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HTRA1Q92743 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
HTRA1Q92743 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.08■□□□□ 0.97
HTRA1Q92743 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HTRA1Q92743 AC129492.7-201ENST00000622992 756 ntBASIC21.08■□□□□ 0.97
HTRA1Q92743 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
HTRA1Q92743 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
HTRA1Q92743 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HTRA1Q92743 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
HTRA1Q92743 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
HTRA1Q92743 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
HTRA1Q92743 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HTRA1Q92743 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HTRA1Q92743 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
HTRA1Q92743 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HTRA1Q92743 SPCS2P3-201ENST00000500401 656 ntBASIC21.07■□□□□ 0.96
HTRA1Q92743 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HTRA1Q92743 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
HTRA1Q92743 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HTRA1Q92743 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HTRA1Q92743 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.07■□□□□ 0.96
HTRA1Q92743 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HTRA1Q92743 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HTRA1Q92743 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HTRA1Q92743 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
HTRA1Q92743 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HTRA1Q92743 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.06■□□□□ 0.96
HTRA1Q92743 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HTRA1Q92743 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HTRA1Q92743 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.06■□□□□ 0.96
HTRA1Q92743 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.06■□□□□ 0.96
HTRA1Q92743 AL024507.2-201ENST00000606070 2574 ntBASIC21.06■□□□□ 0.96
HTRA1Q92743 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HTRA1Q92743 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
HTRA1Q92743 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HTRA1Q92743 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HTRA1Q92743 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HTRA1Q92743 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HTRA1Q92743 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
HTRA1Q92743 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HTRA1Q92743 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HTRA1Q92743 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HTRA1Q92743 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.04■□□□□ 0.96
HTRA1Q92743 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HTRA1Q92743 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.04■□□□□ 0.96
HTRA1Q92743 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HTRA1Q92743 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HTRA1Q92743 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HTRA1Q92743 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HTRA1Q92743 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HTRA1Q92743 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
HTRA1Q92743 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.03■□□□□ 0.96
HTRA1Q92743 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.03■□□□□ 0.96
HTRA1Q92743 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
HTRA1Q92743 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HTRA1Q92743 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
HTRA1Q92743 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HTRA1Q92743 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.03■□□□□ 0.96
HTRA1Q92743 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.03■□□□□ 0.96
HTRA1Q92743 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.03■□□□□ 0.96
HTRA1Q92743 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HTRA1Q92743 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HTRA1Q92743 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
HTRA1Q92743 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.02■□□□□ 0.96
HTRA1Q92743 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
HTRA1Q92743 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HTRA1Q92743 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HTRA1Q92743 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
HTRA1Q92743 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
HTRA1Q92743 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HTRA1Q92743 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HTRA1Q92743 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
HTRA1Q92743 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
HTRA1Q92743 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.01■□□□□ 0.95
HTRA1Q92743 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
HTRA1Q92743 RARRES2P1-201ENST00000474487 481 ntBASIC21.01■□□□□ 0.95
HTRA1Q92743 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.01■□□□□ 0.95
HTRA1Q92743 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HTRA1Q92743 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
HTRA1Q92743 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HTRA1Q92743 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.01■□□□□ 0.95
HTRA1Q92743 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HTRA1Q92743 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
HTRA1Q92743 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21■□□□□ 0.95
HTRA1Q92743 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
HTRA1Q92743 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
HTRA1Q92743 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21■□□□□ 0.95
HTRA1Q92743 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
HTRA1Q92743 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HTRA1Q92743 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HTRA1Q92743 C9orf163-202ENST00000624034 2573 ntBASIC21■□□□□ 0.95
HTRA1Q92743 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
HTRA1Q92743 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21■□□□□ 0.95
HTRA1Q92743 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HTRA1Q92743 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21■□□□□ 0.95
HTRA1Q92743 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
HTRA1Q92743 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.99■□□□□ 0.95
HTRA1Q92743 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
HTRA1Q92743 DUX4L9-201ENST00000449051 1259 ntBASIC20.99■□□□□ 0.95
HTRA1Q92743 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms