Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCHCR1Q8TD31 AC068473.5-201ENST00000616428 2072 ntBASIC23.98■■□□□ 1.43
CCHCR1Q8TD31 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCHCR1Q8TD31 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCHCR1Q8TD31 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCHCR1Q8TD31 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CCHCR1Q8TD31 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.97■■□□□ 1.43
CCHCR1Q8TD31 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.97■■□□□ 1.43
CCHCR1Q8TD31 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CCHCR1Q8TD31 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
CCHCR1Q8TD31 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCHCR1Q8TD31 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.96■■□□□ 1.43
CCHCR1Q8TD31 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCHCR1Q8TD31 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
CCHCR1Q8TD31 AL033527.3-201ENST00000566366 1196 ntBASIC23.96■■□□□ 1.43
CCHCR1Q8TD31 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
CCHCR1Q8TD31 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.96■■□□□ 1.43
CCHCR1Q8TD31 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.96■■□□□ 1.43
CCHCR1Q8TD31 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.95■■□□□ 1.43
CCHCR1Q8TD31 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.43
CCHCR1Q8TD31 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
CCHCR1Q8TD31 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCHCR1Q8TD31 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCHCR1Q8TD31 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCHCR1Q8TD31 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCHCR1Q8TD31 ABCB10P4-201ENST00000566803 2184 ntBASIC23.95■■□□□ 1.42
CCHCR1Q8TD31 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.95■■□□□ 1.42
CCHCR1Q8TD31 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCHCR1Q8TD31 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.42
CCHCR1Q8TD31 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
CCHCR1Q8TD31 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCHCR1Q8TD31 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CCHCR1Q8TD31 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CCHCR1Q8TD31 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CCHCR1Q8TD31 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
CCHCR1Q8TD31 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCHCR1Q8TD31 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCHCR1Q8TD31 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
CCHCR1Q8TD31 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCHCR1Q8TD31 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCHCR1Q8TD31 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCHCR1Q8TD31 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCHCR1Q8TD31 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.92■■□□□ 1.42
CCHCR1Q8TD31 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCHCR1Q8TD31 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCHCR1Q8TD31 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCHCR1Q8TD31 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCHCR1Q8TD31 RPS2P7-201ENST00000447334 885 ntBASIC23.92■■□□□ 1.42
CCHCR1Q8TD31 AC139795.1-202ENST00000500444 432 ntBASIC23.92■■□□□ 1.42
CCHCR1Q8TD31 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCHCR1Q8TD31 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.92■■□□□ 1.42
CCHCR1Q8TD31 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.91■■□□□ 1.42
CCHCR1Q8TD31 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCHCR1Q8TD31 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.91■■□□□ 1.42
CCHCR1Q8TD31 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.91■■□□□ 1.42
CCHCR1Q8TD31 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.91■■□□□ 1.42
CCHCR1Q8TD31 BHLHE23-202ENST00000612929 1109 ntBASIC23.91■■□□□ 1.42
CCHCR1Q8TD31 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.91■■□□□ 1.42
CCHCR1Q8TD31 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCHCR1Q8TD31 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCHCR1Q8TD31 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCHCR1Q8TD31 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.9■■□□□ 1.42
CCHCR1Q8TD31 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCHCR1Q8TD31 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCHCR1Q8TD31 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CCHCR1Q8TD31 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.9■■□□□ 1.42
CCHCR1Q8TD31 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CCHCR1Q8TD31 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCHCR1Q8TD31 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCHCR1Q8TD31 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.9■■□□□ 1.42
CCHCR1Q8TD31 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCHCR1Q8TD31 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.89■■□□□ 1.42
CCHCR1Q8TD31 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.89■■□□□ 1.41
CCHCR1Q8TD31 AC087393.1-201ENST00000582896 145 ntBASIC23.89■■□□□ 1.41
CCHCR1Q8TD31 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCHCR1Q8TD31 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CCHCR1Q8TD31 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CCHCR1Q8TD31 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCHCR1Q8TD31 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCHCR1Q8TD31 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCHCR1Q8TD31 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.88■■□□□ 1.41
CCHCR1Q8TD31 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.88■■□□□ 1.41
CCHCR1Q8TD31 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.88■■□□□ 1.41
CCHCR1Q8TD31 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCHCR1Q8TD31 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC23.88■■□□□ 1.41
CCHCR1Q8TD31 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCHCR1Q8TD31 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.87■■□□□ 1.41
CCHCR1Q8TD31 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCHCR1Q8TD31 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.87■■□□□ 1.41
CCHCR1Q8TD31 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.87■■□□□ 1.41
CCHCR1Q8TD31 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.87■■□□□ 1.41
CCHCR1Q8TD31 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.87■■□□□ 1.41
CCHCR1Q8TD31 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCHCR1Q8TD31 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.87■■□□□ 1.41
CCHCR1Q8TD31 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCHCR1Q8TD31 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCHCR1Q8TD31 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCHCR1Q8TD31 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCHCR1Q8TD31 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCHCR1Q8TD31 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms