Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
EXD3Q8N9H8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
EXD3Q8N9H8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
EXD3Q8N9H8 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EXD3Q8N9H8 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
EXD3Q8N9H8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
EXD3Q8N9H8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EXD3Q8N9H8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EXD3Q8N9H8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EXD3Q8N9H8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.79■■□□□ 1.08
EXD3Q8N9H8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.79■■□□□ 1.08
EXD3Q8N9H8 MIR6821-201ENST00000617625 74 ntBASIC21.79■■□□□ 1.08
EXD3Q8N9H8 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
EXD3Q8N9H8 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EXD3Q8N9H8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EXD3Q8N9H8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.78■■□□□ 1.08
EXD3Q8N9H8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.78■■□□□ 1.08
EXD3Q8N9H8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EXD3Q8N9H8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.78■■□□□ 1.08
EXD3Q8N9H8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.78■■□□□ 1.08
EXD3Q8N9H8 AL136967.2-201ENST00000623968 743 ntBASIC21.78■■□□□ 1.08
EXD3Q8N9H8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EXD3Q8N9H8 AF131216.4-201ENST00000638924 1588 ntBASIC21.78■■□□□ 1.08
EXD3Q8N9H8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EXD3Q8N9H8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
EXD3Q8N9H8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.77■■□□□ 1.08
EXD3Q8N9H8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
EXD3Q8N9H8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.77■■□□□ 1.08
EXD3Q8N9H8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EXD3Q8N9H8 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EXD3Q8N9H8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.76■■□□□ 1.07
EXD3Q8N9H8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
EXD3Q8N9H8 ERN1-208ENST00000606895 2068 ntBASIC21.76■■□□□ 1.07
EXD3Q8N9H8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
EXD3Q8N9H8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.75■■□□□ 1.07
EXD3Q8N9H8 AC010501.1-201ENST00000606270 1962 ntBASIC21.75■■□□□ 1.07
EXD3Q8N9H8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EXD3Q8N9H8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXD3Q8N9H8 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.74■■□□□ 1.07
EXD3Q8N9H8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXD3Q8N9H8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.74■■□□□ 1.07
EXD3Q8N9H8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXD3Q8N9H8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.74■■□□□ 1.07
EXD3Q8N9H8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.74■■□□□ 1.07
EXD3Q8N9H8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXD3Q8N9H8 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXD3Q8N9H8 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXD3Q8N9H8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EXD3Q8N9H8 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EXD3Q8N9H8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EXD3Q8N9H8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EXD3Q8N9H8 AC097381.1-201ENST00000429019 1296 ntBASIC21.73■■□□□ 1.07
EXD3Q8N9H8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.73■■□□□ 1.07
EXD3Q8N9H8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.73■■□□□ 1.07
EXD3Q8N9H8 AL162430.1-201ENST00000480705 870 ntBASIC21.73■■□□□ 1.07
EXD3Q8N9H8 AC087623.3-201ENST00000607047 1098 ntBASIC21.73■■□□□ 1.07
EXD3Q8N9H8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
EXD3Q8N9H8 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EXD3Q8N9H8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.73■■□□□ 1.07
EXD3Q8N9H8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EXD3Q8N9H8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
EXD3Q8N9H8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
EXD3Q8N9H8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.72■■□□□ 1.07
EXD3Q8N9H8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.72■■□□□ 1.07
EXD3Q8N9H8 AF213884.3-201ENST00000563833 479 ntBASIC21.72■■□□□ 1.07
EXD3Q8N9H8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EXD3Q8N9H8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EXD3Q8N9H8 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
EXD3Q8N9H8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
EXD3Q8N9H8 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
EXD3Q8N9H8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EXD3Q8N9H8 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EXD3Q8N9H8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.71■■□□□ 1.07
EXD3Q8N9H8 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EXD3Q8N9H8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
EXD3Q8N9H8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EXD3Q8N9H8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.7■■□□□ 1.06
EXD3Q8N9H8 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.7■■□□□ 1.06
EXD3Q8N9H8 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EXD3Q8N9H8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
EXD3Q8N9H8 SRD5A1P1-201ENST00000442297 786 ntBASIC21.69■■□□□ 1.06
EXD3Q8N9H8 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
EXD3Q8N9H8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EXD3Q8N9H8 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
EXD3Q8N9H8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
EXD3Q8N9H8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.69■■□□□ 1.06
EXD3Q8N9H8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
EXD3Q8N9H8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
EXD3Q8N9H8 MIR939-201ENST00000401314 82 ntBASIC21.68■■□□□ 1.06
EXD3Q8N9H8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
EXD3Q8N9H8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.68■■□□□ 1.06
EXD3Q8N9H8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
EXD3Q8N9H8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
EXD3Q8N9H8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EXD3Q8N9H8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.67■■□□□ 1.06
EXD3Q8N9H8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.67■■□□□ 1.06
EXD3Q8N9H8 MIR6722-201ENST00000617286 78 ntBASIC21.67■■□□□ 1.06
EXD3Q8N9H8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EXD3Q8N9H8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.67■■□□□ 1.06
EXD3Q8N9H8 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms