Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
LINC00311Q8N616 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC00311Q8N616 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.8■□□□□ 0.6
LINC00311Q8N616 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC00311Q8N616 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.8■□□□□ 0.6
LINC00311Q8N616 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.8■□□□□ 0.6
LINC00311Q8N616 AC103724.3-201ENST00000564481 992 ntBASIC18.8■□□□□ 0.6
LINC00311Q8N616 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.8■□□□□ 0.6
LINC00311Q8N616 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00311Q8N616 AL022069.1-201ENST00000568025 1636 ntBASIC18.8■□□□□ 0.6
LINC00311Q8N616 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00311Q8N616 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LINC00311Q8N616 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00311Q8N616 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00311Q8N616 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00311Q8N616 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00311Q8N616 AC004812.2-201ENST00000611079 2094 ntBASIC18.79■□□□□ 0.6
LINC00311Q8N616 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00311Q8N616 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.79■□□□□ 0.6
LINC00311Q8N616 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.79■□□□□ 0.6
LINC00311Q8N616 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
LINC00311Q8N616 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LINC00311Q8N616 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LINC00311Q8N616 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LINC00311Q8N616 AF131216.4-201ENST00000638924 1588 ntBASIC18.78■□□□□ 0.6
LINC00311Q8N616 KRT8P33-201ENST00000508125 1423 ntBASIC18.78■□□□□ 0.6
LINC00311Q8N616 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00311Q8N616 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00311Q8N616 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00311Q8N616 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LINC00311Q8N616 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00311Q8N616 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LINC00311Q8N616 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.77■□□□□ 0.6
LINC00311Q8N616 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00311Q8N616 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.77■□□□□ 0.6
LINC00311Q8N616 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LINC00311Q8N616 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
LINC00311Q8N616 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00311Q8N616 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00311Q8N616 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.76■□□□□ 0.59
LINC00311Q8N616 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00311Q8N616 AC131274.2-201ENST00000580697 1507 ntBASIC18.76■□□□□ 0.59
LINC00311Q8N616 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00311Q8N616 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00311Q8N616 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00311Q8N616 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00311Q8N616 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00311Q8N616 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00311Q8N616 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00311Q8N616 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LINC00311Q8N616 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00311Q8N616 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00311Q8N616 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00311Q8N616 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00311Q8N616 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.75■□□□□ 0.59
LINC00311Q8N616 AL031848.2-201ENST00000607670 837 ntBASIC18.75■□□□□ 0.59
LINC00311Q8N616 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LINC00311Q8N616 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00311Q8N616 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.74■□□□□ 0.59
LINC00311Q8N616 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00311Q8N616 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00311Q8N616 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00311Q8N616 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.74■□□□□ 0.59
LINC00311Q8N616 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
LINC00311Q8N616 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00311Q8N616 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.73■□□□□ 0.59
LINC00311Q8N616 AC137630.3-201ENST00000607245 391 ntBASIC18.73■□□□□ 0.59
LINC00311Q8N616 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
LINC00311Q8N616 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00311Q8N616 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.73■□□□□ 0.59
LINC00311Q8N616 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00311Q8N616 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00311Q8N616 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
LINC00311Q8N616 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00311Q8N616 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LINC00311Q8N616 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00311Q8N616 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.72■□□□□ 0.59
LINC00311Q8N616 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00311Q8N616 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.72■□□□□ 0.59
LINC00311Q8N616 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00311Q8N616 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00311Q8N616 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00311Q8N616 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
LINC00311Q8N616 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00311Q8N616 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00311Q8N616 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00311Q8N616 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.71■□□□□ 0.59
LINC00311Q8N616 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00311Q8N616 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LINC00311Q8N616 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LINC00311Q8N616 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.71■□□□□ 0.59
LINC00311Q8N616 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00311Q8N616 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LINC00311Q8N616 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.71■□□□□ 0.59
LINC00311Q8N616 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.7■□□□□ 0.58
LINC00311Q8N616 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.7■□□□□ 0.58
LINC00311Q8N616 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.7■□□□□ 0.58
LINC00311Q8N616 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.7■□□□□ 0.58
LINC00311Q8N616 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LINC00311Q8N616 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms