Protein–RNA interactions for Protein: Q8N587

ZNF561, Zinc finger protein 561, humanhuman

Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561Q8N587 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF561Q8N587 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF561Q8N587 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF561Q8N587 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF561Q8N587 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF561Q8N587 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.54■□□□□ 0.72
ZNF561Q8N587 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
ZNF561Q8N587 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF561Q8N587 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.54■□□□□ 0.72
ZNF561Q8N587 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF561Q8N587 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF561Q8N587 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF561Q8N587 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF561Q8N587 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF561Q8N587 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF561Q8N587 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
ZNF561Q8N587 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
ZNF561Q8N587 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF561Q8N587 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF561Q8N587 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.53■□□□□ 0.72
ZNF561Q8N587 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.53■□□□□ 0.72
ZNF561Q8N587 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF561Q8N587 AC090877.2-201ENST00000558441 1738 ntBASIC19.53■□□□□ 0.72
ZNF561Q8N587 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF561Q8N587 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
ZNF561Q8N587 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF561Q8N587 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.52■□□□□ 0.72
ZNF561Q8N587 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF561Q8N587 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF561Q8N587 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.52■□□□□ 0.72
ZNF561Q8N587 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ZNF561Q8N587 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ZNF561Q8N587 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF561Q8N587 AC011551.1-201ENST00000614101 683 ntBASIC19.52■□□□□ 0.72
ZNF561Q8N587 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF561Q8N587 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
ZNF561Q8N587 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
ZNF561Q8N587 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF561Q8N587 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.51■□□□□ 0.71
ZNF561Q8N587 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF561Q8N587 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.51■□□□□ 0.71
ZNF561Q8N587 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF561Q8N587 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF561Q8N587 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF561Q8N587 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF561Q8N587 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ZNF561Q8N587 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF561Q8N587 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.51■□□□□ 0.71
ZNF561Q8N587 PVT1_1.1-201ENST00000615125 194 ntBASIC19.51■□□□□ 0.71
ZNF561Q8N587 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF561Q8N587 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF561Q8N587 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF561Q8N587 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF561Q8N587 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF561Q8N587 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ZNF561Q8N587 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF561Q8N587 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF561Q8N587 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF561Q8N587 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF561Q8N587 AC068473.5-201ENST00000616428 2072 ntBASIC19.5■□□□□ 0.71
ZNF561Q8N587 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF561Q8N587 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF561Q8N587 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF561Q8N587 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF561Q8N587 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF561Q8N587 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF561Q8N587 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF561Q8N587 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF561Q8N587 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.49■□□□□ 0.71
ZNF561Q8N587 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF561Q8N587 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF561Q8N587 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF561Q8N587 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF561Q8N587 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF561Q8N587 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF561Q8N587 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF561Q8N587 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF561Q8N587 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ZNF561Q8N587 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
ZNF561Q8N587 MIR4508-201ENST00000584178 70 ntBASIC19.48■□□□□ 0.71
ZNF561Q8N587 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF561Q8N587 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ZNF561Q8N587 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.48■□□□□ 0.71
ZNF561Q8N587 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF561Q8N587 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF561Q8N587 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF561Q8N587 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ZNF561Q8N587 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF561Q8N587 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ZNF561Q8N587 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ZNF561Q8N587 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.47■□□□□ 0.71
ZNF561Q8N587 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF561Q8N587 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.47■□□□□ 0.71
ZNF561Q8N587 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF561Q8N587 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF561Q8N587 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF561Q8N587 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF561Q8N587 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
ZNF561Q8N587 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF561Q8N587 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms